hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14042560/chunk_1/iprscan-20080502-14042560.nocrc
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Query sequence: KIAA0822
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00382                                                  74.2    1.7e-17   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00382    1/2     518   662 ..     1    92 []    43.5  2.8e-08
SM00382    2/2    1285  1465 ..     1    92 []    30.6  0.00021

Alignments of top-scoring domains:
SM00382: domain 1 of 2, from 518 to 662: score 43.5, E = 2.8e-08
                   *->pgevvllvGppGsGKTTlaralarllgp...........gviyidge
                       g+++++ G +G+GK+Tl++ l +l+ p++++ +  +++   + d+e
    KIAA0822   518    EGQITAILGHSGAGKSTLLNILSGLSVPtkgsvtiynnkLSEMADLE 564  

                   ...........................ggqrirlalalarkdvlllDEit
                   + ++  +   +++ + +    +++ + ++++  ++ + + k + llDE+t
    KIAA0822   565 nlskltgvcpqsnvqfdfltvrenlrlFAKIKGILPQEVDKEIFLLDEPT 614  

                   slld.................vtviattndldpallrrrfdrrivllril
                   + ld  ++++  +++++++ ++ +++ t+ +++ + +  +dr+++l ++ 
    KIAA0822   615 AGLDpfsrhqvwnllkerktdRVILFSTQ-FMDEADI-LADRKVFLSQGK 662  

                   <-*
                      
    KIAA0822     -     -    

SM00382: domain 2 of 2, from 1285 to 1465: score 30.6, E = 0.00021
                   *->pgevvllvGppGsGKTTlaralarllgp..gviyidge.........
                      +gev++l G +G+GK+T ++ + +  +p+ g +++ g+++++  +  
    KIAA0822  1285    KGEVLGLLGHNGAGKSTSIKVITGDTKPtaGQVLLKGSgggdalefl 1331 

                   ..................................................
                   +   +++    +   +++ +     ++ ++++ +    +  +  + +++ 
    KIAA0822  1332 gycpqenalwpnltvrqhlevyaavkglrkgdaevaitrlvdalklqdql 1381 

                   .........ggqrir.lalalark.dvlllDEitslld............
                   ++  +  ++g++r    +l ++ +++v+llDE+ +  d +++++  +  +
    KIAA0822  1382 kspvktlseGIKRKLcFVLSILGNpSVVLLDEPSTGMDpegqqqmwqair 1431 

                   .......vtviattndldpallrrrfdrrivl.lril<-*
                      ++ ++  ++tt+    ++ + ++++r+ +   ++   
    KIAA0822  1432 atfrnteRGALLTTH---YMAEAEAVCDRVAImVSGR    1465 

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