hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13335036/chunk_1/iprscan-20080502-13335036.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0805
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF05041.5.ls Pecanex protein (C-terminus)                  583.6   1.7e-172   1
PF05041.5.fs Pecanex protein (C-terminus)                  581.6   6.8e-172   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF05041.5.fs   1/1     765   995 ..     1   238 []   581.6 6.8e-172
PF05041.5.ls   1/1     765   995 ..     1   238 []   583.6 1.7e-172

Alignments of top-scoring domains:
PF05041.5.fs: domain 1 of 1, from 765 to 995: score 581.6, E = 6.8e-172
                   *->eeiakvkvdKdfdvelVtlCyalsLlgrrsLatasghilssavEsFl
                      ++   v+vdK  d++lVtlCy+l++lgrr+L+tas h++ss++EsFl
    KIAA0805   765    KP---VDVDK--DSSLVTLCYGLCVLGRRALGTAS-HHMSSNLESFL 805  

                   YGLHaLFKGdfrItsvrdeWvfadmeLlrqvvlpAvrmaLKLhqDhftlp
                   YGLHaLFKGdfrI+s rdeW+fadmeLlr+vv+p++rm++KLhqDhft+p
    KIAA0805   806 YGLHALFKGDFRISSIRDEWIFADMELLRKVVVPGIRMSIKLHQDHFTSP 855  

                   defddpreLykaieeyerdlvIshesDpkWrsAiLankPsLlaLrhvmdd
                   de+ddp++Ly+ai+++e++lvI+he+Dp+WrsA+Lan+PsLlaLrhvmdd
    KIAA0805   856 DEYDDPTVLYEAIVSHEKNLVIAHEGDPAWRSAVLANSPSLLALRHVMDD 905  

                   GideyriimLneryLsirViKLNrEcVRglWAgqqqELiylrNrnpERgS
                   G++ey+iimLn+ryLs+rViK+N+EcVRglWAgqqqEL++lrNrnpERgS
    KIAA0805   906 GTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQQQELVFLRNRNPERGS 955  

                   IQnakqlLRNlinssadqPiGYPIYvSkPLTTSyadshiqL<-*
                   IQnakq+LRN+inss+dqPiGYPI+vS PLTTSy+dsh qL   
    KIAA0805   956 IQNAKQALRNMINSSCDQPIGYPIFVS-PLTTSYSDSHEQL    995  

PF05041.5.ls: domain 1 of 1, from 765 to 995: score 583.6, E = 1.7e-172
                   *->eeiakvkvdKdfdvelVtlCyalsLlgrrsLatasghilssavEsFl
                      ++   v+vdK  d++lVtlCy+l++lgrr+L+tas h++ss++EsFl
    KIAA0805   765    KP---VDVDK--DSSLVTLCYGLCVLGRRALGTAS-HHMSSNLESFL 805  

                   YGLHaLFKGdfrItsvrdeWvfadmeLlrqvvlpAvrmaLKLhqDhftlp
                   YGLHaLFKGdfrI+s rdeW+fadmeLlr+vv+p++rm++KLhqDhft+p
    KIAA0805   806 YGLHALFKGDFRISSIRDEWIFADMELLRKVVVPGIRMSIKLHQDHFTSP 855  

                   defddpreLykaieeyerdlvIshesDpkWrsAiLankPsLlaLrhvmdd
                   de+ddp++Ly+ai+++e++lvI+he+Dp+WrsA+Lan+PsLlaLrhvmdd
    KIAA0805   856 DEYDDPTVLYEAIVSHEKNLVIAHEGDPAWRSAVLANSPSLLALRHVMDD 905  

                   GideyriimLneryLsirViKLNrEcVRglWAgqqqELiylrNrnpERgS
                   G++ey+iimLn+ryLs+rViK+N+EcVRglWAgqqqEL++lrNrnpERgS
    KIAA0805   906 GTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQQQELVFLRNRNPERGS 955  

                   IQnakqlLRNlinssadqPiGYPIYvSkPLTTSyadshiqL<-*
                   IQnakq+LRN+inss+dqPiGYPI+vS PLTTSy+dsh qL   
    KIAA0805   956 IQNAKQALRNMINSSCDQPIGYPIFVS-PLTTSYSDSHEQL    995  

//