hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13320321/chunk_1/iprscan-20080502-13320321.nocrc
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Query sequence: KIAA0804
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00184                                                  30.8    0.00019   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1    1041  1092 ..     1    23 []    30.8  0.00019

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 1041 to 1092: score 30.8, E = 0.00019
                   *->CpICle...........pvvlpCgH.FCr.Ci...............
                      C+ICl++ +++++  ++++v  CgH ++  C+++++ + + ++++++
    KIAA0804  1041    CSICLQqykrrqemadeIIVFSCGHlYHSfCLqnkectvefegqtrw 1087 

                   .CPlC<-*
                   +C  C   
    KIAA0804  1088 tCYKC    1092 

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