hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13195077/chunk_1/iprscan-20080502-13195077.nocrc
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Query sequence: KIAA0797
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF02902.9.fs  Ulp1 protease family, C-terminal cataly   271.3    1.4e-83   1
PF02902.9.ls  Ulp1 protease family, C-terminal cataly   273.2    4.8e-79   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF02902.9.fs    1/1     680  1088 ..     1   245 []   271.3  1.4e-83
PF02902.9.ls    1/1     680  1088 ..     1   245 []   273.2  4.8e-79

Alignments of top-scoring domains:
PF02902.9.fs: domain 1 of 1, from 680 to 1088: score 271.3, E = 1.4e-83
                   *->isitmrdlktltkkewlnDtiidfylrylaerllpdPilkekftsal
                      is+t++dl++l+++e+lnD iidfyl+yl++++l+      k+ + +
    KIAA0797   680    ISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLK------KEDADR 720  

                   thffnsFfytklksrfkwgde......kdelykdvkrgtargekkkkkdl
                   +h+f+sFfy++l++r ++++e+++ + +++++ +vk++t      +++d+
    KIAA0797   721 IHIFSSFFYKRLNQRERRNHEttnlsiQQKRHGRVKTWT------RHVDI 764  

                   fdkDyiyvPinedgkksHWvllvIdlpdkkk...................
                   f+kD+i+vP+ne     HW+l+v++ p  +k++ +++++ +++   ++ +
    KIAA0797   765 FEKDFIFVPLNEAA---HWFLAVVCFPGLEKpkyepnphyhenaviqkcs 811  

                   ..................................................
                   + +++  +++ ++ ++ +++++ ++  ++  ++++     ++++++++++
    KIAA0797   812 tvedscisssasemescsqnssakpvikkmlnkkhciavidsnpgqeesd 861  

                   ..................................................
                   ++ +++  + + + ++ +++ +++++ +++++++++  ++++++++ +++
    KIAA0797   862 prykrnicsvkysvkkinhtaseneefnkgestsqkvadrtksenglqne 911  

                   ..................................................
                   + ++++++++ ++ + + ++++++ ++  +++  + ++++++++++++++
    KIAA0797   912 slssthhtdglskirlnysdespeagkmledelvdfsedqdnqddssddg 961  

                   ....................kdqstivilDSlislntekavktitalarp
                      +++ +++ ++ + +++ ++q++i  +DSl++++++++vk   +l+++
    KIAA0797   962 fladdncsseigqwhlkptiCKQPCILLMDSLRGPSRSNVVK---ILREY 1008 

                   lsdelpylkrerlslkksfdkkswdlqpfeikrltmkvPQQpngyDCGiy
                   l++e++  k++    k+sf+k +++       +  +kvPQQ+n++DCG+y
    KIAA0797  1009 LEVEWEVKKGS----KRSFSKDVMK-------GSNPKVPQQNNFSDCGVY 1047 

                   vlkfielfaegppqdfmttindk.klkdlksfrkklakeiyeel<-*
                   vl+++e f+e+p+ +f +   +++++++ +  r+++++e+++ +   
    KIAA0797  1048 VLQYVESFFENPILSFEL---PMnLANWFPPPRMRTKREEIRNI    1088 

PF02902.9.ls: domain 1 of 1, from 680 to 1088: score 273.2, E = 4.8e-79
                   *->isitmrdlktltkkewlnDtiidfylrylaerllpdPilkekftsal
                      is+t++dl++l+++e+lnD iidfyl+yl++++l+      k+ + +
    KIAA0797   680    ISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLK------KEDADR 720  

                   thffnsFfytklksrfkwgde......kdelykdvkrgtargekkkkkdl
                   +h+f+sFfy++l++r ++++e+++ + +++++ +vk++t      +++d+
    KIAA0797   721 IHIFSSFFYKRLNQRERRNHEttnlsiQQKRHGRVKTWT------RHVDI 764  

                   fdkDyiyvPinedgkksHWvllvIdlpdkkk...................
                   f+kD+i+vP+ne     HW+l+v++ p  +k++ +++++ +++   ++ +
    KIAA0797   765 FEKDFIFVPLNEAA---HWFLAVVCFPGLEKpkyepnphyhenaviqkcs 811  

                   ..................................................
                   + +++  +++ ++ ++ +++++ ++  ++  ++++     ++++++++++
    KIAA0797   812 tvedscisssasemescsqnssakpvikkmlnkkhciavidsnpgqeesd 861  

                   ..................................................
                   ++ +++  + + + ++ +++ +++++ +++++++++  ++++++++ +++
    KIAA0797   862 prykrnicsvkysvkkinhtaseneefnkgestsqkvadrtksenglqne 911  

                   ..................................................
                   + ++++++++ ++ + + ++++++ ++  +++  + ++++++++++++++
    KIAA0797   912 slssthhtdglskirlnysdespeagkmledelvdfsedqdnqddssddg 961  

                   ....................kdqstivilDSlislntekavktitalarp
                      +++ +++ ++ + +++ ++q++i  +DSl++++++++vk   +l+++
    KIAA0797   962 fladdncsseigqwhlkptiCKQPCILLMDSLRGPSRSNVVK---ILREY 1008 

                   lsdelpylkrerlslkksfdkkswdlqpfeikrltmkvPQQpngyDCGiy
                   l++e++  k++    k+sf+k +++       +  +kvPQQ+n++DCG+y
    KIAA0797  1009 LEVEWEVKKGS----KRSFSKDVMK-------GSNPKVPQQNNFSDCGVY 1047 

                   vlkfielfaegppqdfmttindk.klkdlksfrkklakeiyeel<-*
                   vl+++e f+e+p+ +f +   +++++++ +  r+++++e+++ +   
    KIAA0797  1048 VLQYVESFFENPILSFEL---PMnLANWFPPPRMRTKREEIRNI    1088 

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