hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13161837/chunk_1/iprscan-20080502-13161837.nocrc
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Query sequence: KIAA0795
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00612                                                 362.4   2.8e-104   6

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00612      1/6     180   227 ..     1    55 []    66.1  4.5e-15
SM00612      2/6     228   274 ..     1    55 []    73.6  2.4e-17
SM00612      3/6     275   321 ..     1    55 []    76.0  4.7e-18
SM00612      4/6     322   368 ..     1    55 []    54.6  1.3e-11
SM00612      5/6     369   415 ..     1    55 []    33.4  3.1e-05
SM00612      6/6     416   462 ..     1    55 []    58.7  7.5e-13

Alignments of top-scoring domains:
SM00612: domain 1 of 6, from 180 to 227: score 66.1, E = 4.5e-15
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      +iY+vGG + +       g++l+ vEv+Dp  n W+++ +M+t+Rs+
    KIAA0795   180    LIYAVGGLNSA-------GDSLNVVEVFDPIANCWERCRPMTTARSR 219  

                   agvaving<-*
                   +gvav+ng   
    KIAA0795   220 VGVAVVNG    227  

SM00612: domain 2 of 6, from 228 to 274: score 73.6, E = 2.4e-17
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      ++Y++GG+dg        + rl++vE Y+pet++W++v sM+++Rs 
    KIAA0795   228    LLYAIGGYDG--------QLRLSTVEAYNPETDTWTRVGSMNSKRSA 266  

                   agvaving<-*
                   +g +v++g   
    KIAA0795   267 MGTVVLDG    274  

SM00612: domain 3 of 6, from 275 to 321: score 76.0, E = 4.7e-18
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      +iYv+GG+dg        +++l+svE Y+pet+kW++v+sM++ Rs 
    KIAA0795   275    QIYVCGGYDG--------NSSLSSVETYSPETDKWTVVTSMSSNRSA 313  

                   agvaving<-*
                   agv+v++g   
    KIAA0795   314 AGVTVFEG    321  

SM00612: domain 4 of 6, from 322 to 368: score 54.6, E = 1.3e-11
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      +iYv GG+dg         q+++svE Y+++t +W+p + M ++R++
    KIAA0795   322    RIYVSGGHDGL--------QIFSSVEHYNHHTATWHPAAGMLNKRCR 360  

                   agvaving<-*
                   +g+a+++    
    KIAA0795   361 HGAASLGS    368  

SM00612: domain 5 of 6, from 369 to 415: score 33.4, E = 3.1e-05
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      k +v+GG+dg        + +l+ +E+Y+   ++W  + +M+t+Rs+
    KIAA0795   369    KMFVCGGYDG--------SGFLSIAEMYSSVADQWCLIVPMHTRRSR 407  

                   agvaving<-*
                   +++++  g   
    KIAA0795   408 VSLVASCG    415  

SM00612: domain 6 of 6, from 416 to 462: score 58.7, E = 7.5e-13
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      ++Y+vGG+dg        ++ l+svE+YDpet+ W+ +++M +   g
    KIAA0795   416    RLYAVGGYDG--------QSNLSSVEMYDPETDCWTFMAPMACHEGG 454  

                   agvaving<-*
                   +gv+ i     
    KIAA0795   455 VGVGCIPL    462  

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