hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13010189/chunk_1/iprscan-20080502-13010189.nocrc
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Query sequence: KIAA0786
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00303                                                  98.9    5.8e-25   1
SM00008                                                  83.9      2e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00008    1/1      27    92 ..     1    89 []    83.9    2e-20
SM00303    1/1     346   398 ..     1    51 []    98.9  5.8e-25

Alignments of top-scoring domains:
SM00008: domain 1 of 1, from 27 to 92: score 83.9, E = 2e-20
                   *->tdlgCpatwDgiiCWpsTpaGqlvavpCPeyfsgfsnktggNrtqGn
                      ++++C+a    +i Wp+T+ G++v++pCP++++g+            
    KIAA0786    27    PERFCEALDSKGIKWPQTQRGMMVERPCPKGTRGT------------ 61   

                   asRnCtedtGvGgWsepfpgaeSnrtWpnysnCtsndyeelk<-*
                   as++C  +t  G+W++++         p++snCts+++++l    
    KIAA0786    62 ASYLCMIST--GTWNPKG---------PDLSNCTSHWVNQLA    92   

SM00303: domain 1 of 1, from 346 to 398: score 98.9, E = 5.8e-25
                   *->snpiCvfWdese...tgeWstrGCelvetnkpthttCsCnHLTsFAv
                      +n++C+fW++se++ +g+Wst+GC+lv+tnk t+ttC C+HLT+FA+
    KIAA0786   346    FNANCSFWNYSErtmMGYWSTQGCKLVDTNK-TRTTCACSHLTNFAI 391  

                   Lmdvspn<-*
                   Lm+++++   
    KIAA0786   392 LMAHREI    398  

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