hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-13010189/chunk_1/iprscan-20080502-13010189.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0786 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02354.7.ls Latrophilin Cytoplasmic C-terminal region 965.8 1.5e-287 1 PF02354.7.fs Latrophilin Cytoplasmic C-terminal region 964.1 5e-287 1 PF00002.15.ls 7 transmembrane receptor (Secretin family 388.5 9.1e-114 1 PF00002.15.fs 7 transmembrane receptor (Secretin family 386.6 3.5e-113 1 PF01825.11.fs Latrophilin/CL-1-like GPS domain 84.6 2.1e-24 1 PF01825.11.ls Latrophilin/CL-1-like GPS domain 86.6 7.3e-23 1 PF02793.12.fs Hormone receptor domain 65.3 3.3e-17 1 PF02793.12.ls Hormone receptor domain 67.0 5.5e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF02793.12.fs 1/1 28 88 .. 1 78 [] 65.3 3.3e-17 PF02793.12.ls 1/1 28 88 .. 1 78 [] 67.0 5.5e-17 PF01825.11.ls 1/1 346 393 .. 1 48 [] 86.6 7.3e-23 PF01825.11.fs 1/1 346 393 .. 1 48 [] 84.6 2.1e-24 PF00002.15.fs 1/1 406 653 .. 1 293 [] 386.6 3.5e-113 PF00002.15.ls 1/1 406 653 .. 1 293 [] 388.5 9.1e-114 PF02354.7.fs 1/1 663 1021 .] 1 404 [] 964.1 5e-287 PF02354.7.ls 1/1 663 1021 .] 1 404 [] 965.8 1.5e-287 Alignments of top-scoring domains: PF02793.12.fs: domain 1 of 1, from 28 to 88: score 65.3, E = 3.3e-17 *->glgCprtwDgitCWPrtpaGqlvvvpCPdyfsgfnydttgdfssgna + +C++ +++ WP+t++G++v++pCP++++g+ a KIAA0786 28 ERFCEALDSKGIKWPQTQRGMMVERPCPKGTRGT------------A 62 yRnClenGwwerhpnsnwpwpnysaCtspey<-* ++ C + + n+ +p++s+Cts++ KIAA0786 63 SYLCMISTGTW-----NPKGPDLSNCTSHWV 88 PF02793.12.ls: domain 1 of 1, from 28 to 88: score 67.0, E = 5.5e-17 *->glgCprtwDgitCWPrtpaGqlvvvpCPdyfsgfnydttgdfssgna + +C++ +++ WP+t++G++v++pCP++++g+ a KIAA0786 28 ERFCEALDSKGIKWPQTQRGMMVERPCPKGTRGT------------A 62 yRnClenGwwerhpnsnwpwpnysaCtspey<-* ++ C + + n+ +p++s+Cts++ KIAA0786 63 SYLCMISTGTW-----NPKGPDLSNCTSHWV 88 PF01825.11.ls: domain 1 of 1, from 346 to 393: score 86.6, E = 7.3e-23 *->snptCvfWdese.ggqGgWstdGCqlgvssndthttClCnHLTsFAv +n+ C fW++se+++ G Wst+GC+l v++n t+ttC C+HLT+FA+ KIAA0786 346 FNANCSFWNYSErTMMGYWSTQGCKL-VDTNKTRTTCACSHLTNFAI 391 Lm<-* Lm KIAA0786 392 LM 393 PF01825.11.fs: domain 1 of 1, from 346 to 393: score 84.6, E = 2.1e-24 *->snptCvfWdese.ggqGgWstdGCqlgvssndthttClCnHLTsFAv +n+ C fW++se+++ G Wst+GC+l v++n t+ttC C+HLT+FA+ KIAA0786 346 FNANCSFWNYSErTMMGYWSTQGCKL-VDTNKTRTTCACSHLTNFAI 391 Lm<-* Lm KIAA0786 392 LM 393 PF00002.15.fs: domain 1 of 1, from 406 to 653: score 386.6, E = 3.5e-113 *->lllLkviytVGyslSLvaLllAiaifllFRkLhCtRNyIHlNLfaSf llL+vi++VG+ +SLv+L+++i++f++FR L+++RN+IH+NL++ + KIAA0786 406 ELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINL 452 iLraisflikdavlfnsvglseadqlsweeslhcsasagkitmivvVgCk ++++ +fli++++++ ++ C KIAA0786 453 FIAEFIFLIGIDKTKYAIA-----------------------------CP 473 vvavflhYfflaNFfWmLvEGlYLhtLlvvtVevffserkylwwYlliGW ++a++lh+ffla+F+Wm++EG++L+++l Vevf+se +++++Y+++G+ KIAA0786 474 IFAGLLHFFFLAAFAWMCLEGVQLYLML---VEVFESEYSRKKYYYVAGY 520 GvPavfVgiWaivrpdkagygnegCCWlsnedngyfwWiikGPvllvilv +Pa +Vg++a+++++ +yg+e+ CWl+ ++yf+W++ GPv+++il+ KIAA0786 521 LFPATVVGVSAAIDYK--SYGTEKACWLHV--DNYFIWSFIGPVTFIILL 566 NfilFinilriLvqKlridslspdmgetdqyrkkrlaKStLlLlPLLGit N+i+++++l+++v++ + +l+pd +++++++ +++ ++++Ll+LLG+t KIAA0786 567 NIIFLVITLCKMVKHSN--TLKPDSSRLENIK--SWVLGAFALLCLLGLT 612 wvlflfapeddarGvssivflylflilnSfQGFfVavlYCFLNgEV<-* w ++l+++++ +iv++ylf+i+n fQG f+++++C L+++V KIAA0786 613 WSFGLLFINE-----ETIVMAYLFTIFNAFQGVFIFIFHCALQKKV 653 PF00002.15.ls: domain 1 of 1, from 406 to 653: score 388.5, E = 9.1e-114 *->lllLkviytVGyslSLvaLllAiaifllFRkLhCtRNyIHlNLfaSf llL+vi++VG+ +SLv+L+++i++f++FR L+++RN+IH+NL++ + KIAA0786 406 ELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINL 452 iLraisflikdavlfnsvglseadqlsweeslhcsasagkitmivvVgCk ++++ +fli++++++ ++ C KIAA0786 453 FIAEFIFLIGIDKTKYAIA-----------------------------CP 473 vvavflhYfflaNFfWmLvEGlYLhtLlvvtVevffserkylwwYlliGW ++a++lh+ffla+F+Wm++EG++L+++l Vevf+se +++++Y+++G+ KIAA0786 474 IFAGLLHFFFLAAFAWMCLEGVQLYLML---VEVFESEYSRKKYYYVAGY 520 GvPavfVgiWaivrpdkagygnegCCWlsnedngyfwWiikGPvllvilv +Pa +Vg++a+++++ +yg+e+ CWl+ ++yf+W++ GPv+++il+ KIAA0786 521 LFPATVVGVSAAIDYK--SYGTEKACWLHV--DNYFIWSFIGPVTFIILL 566 NfilFinilriLvqKlridslspdmgetdqyrkkrlaKStLlLlPLLGit N+i+++++l+++v++ + +l+pd +++++++ +++ ++++Ll+LLG+t KIAA0786 567 NIIFLVITLCKMVKHSN--TLKPDSSRLENIK--SWVLGAFALLCLLGLT 612 wvlflfapeddarGvssivflylflilnSfQGFfVavlYCFLNgEV<-* w ++l+++++ +iv++ylf+i+n fQG f+++++C L+++V KIAA0786 613 WSFGLLFINE-----ETIVMAYLFTIFNAFQGVFIFIFHCALQKKV 653 PF02354.7.fs: domain 1 of 1, from 663 to 1021: score 964.1, E = 5e-287 *->hihccSllPrgsPrSalkeSskdsgkrsgSgdPlryslGsqSRIRRM h +cc++lP++sP+S++k+S+ ++++r++Sg +qSRIRRM KIAA0786 663 HSYCCGGLPTESPHSSVKASTTRTSARYSSG--------TQSRIRRM 701 WNDTVRKQsESSFiaGDINStatLNrGamgNhLLtNplLrPhGtnnPYNT WNDTVRKQsESSFi+GDINSt+tLN+G++gN+LLtNplLrPhGtnnPYNT KIAA0786 702 WNDTVRKQSESSFISGDINSTSTLNQGMTGNYLLTNPLLRPHGTNNPYNT 751 LLAEsvvcNapSapvFNspgsllePKHsLnnaRdtSaMDTLPLNGNFnNS LLAE+vvcNapSapvFNspg HsLnnaRdtSaMDTLPLNGNFnNS KIAA0786 752 LLAETVVCNAPSAPVFNSPG------HSLNNARDTSAMDTLPLNGNFNNS 795 YSLrsGdYhlsdGvqvvDRGlnlndAtAfEKmIisELvhNYiPSYLNlrg YSL +GdY d vqvvD+Gl+lnd tAfEKmIisELvhN Nlrg KIAA0786 796 YSLHKGDYN--DSVQVVDCGLSLND-TAFEKMIISELVHN------NLRG 836 rSseakrlelekpVkpvigGssSEDdAivlDdAslFnHedslgLELlhke Ss++++lel +pVkpvigGssSEDdAiv+D++sl +H d++gLEL hke KIAA0786 837 -SSKTHNLELTLPVKPVIGGSSSEDDAIVADASSL-MHSDNPGLELHHKE 884 leaPLLppRvySvENHqLYqsdRRRiPkKvKPdeseSfvaeltaeadedl leaPL+p+R++S+ LYq++ kKvK + ++S+v++ltaea+ +l KIAA0786 885 LEAPLIPQRTHSL----LYQPQ-----KKVKSEGTDSYVSQLTAEAEDHL 925 qSPnRDSLYtSmpnLrDsPsypesspetqaEdLsPpppAkcGdeeDiYYk qSPnRDSLYtSmpnLrDsP ypessp+ + EdLsP+++++ +e+ iYYk KIAA0786 926 QSPNRDSLYTSMPNLRDSP-YPESSPD-MEEDLSPSRRSE--NED-IYYK 970 SmPPnLgARnHvHqLqtYYQvsRGssdGYivppnkeGtiPeGSSdvREGq Sm PnLgA+ qLq++YQ+sRG+sdGYi+p+nkeG+iPeG dvREGq KIAA0786 971 SM-PNLGAGH---QLQMCYQISRGNSDGYIIPINKEGCIPEG--DVREGQ 1014 mqLVTSL<-* mqLVTSL KIAA0786 1015 MQLVTSL 1021 PF02354.7.ls: domain 1 of 1, from 663 to 1021: score 965.8, E = 1.5e-287 *->hihccSllPrgsPrSalkeSskdsgkrsgSgdPlryslGsqSRIRRM h +cc++lP++sP+S++k+S+ ++++r++Sg +qSRIRRM KIAA0786 663 HSYCCGGLPTESPHSSVKASTTRTSARYSSG--------TQSRIRRM 701 WNDTVRKQsESSFiaGDINStatLNrGamgNhLLtNplLrPhGtnnPYNT WNDTVRKQsESSFi+GDINSt+tLN+G++gN+LLtNplLrPhGtnnPYNT KIAA0786 702 WNDTVRKQSESSFISGDINSTSTLNQGMTGNYLLTNPLLRPHGTNNPYNT 751 LLAEsvvcNapSapvFNspgsllePKHsLnnaRdtSaMDTLPLNGNFnNS LLAE+vvcNapSapvFNspg HsLnnaRdtSaMDTLPLNGNFnNS KIAA0786 752 LLAETVVCNAPSAPVFNSPG------HSLNNARDTSAMDTLPLNGNFNNS 795 YSLrsGdYhlsdGvqvvDRGlnlndAtAfEKmIisELvhNYiPSYLNlrg YSL +GdY d vqvvD+Gl+lnd tAfEKmIisELvhN Nlrg KIAA0786 796 YSLHKGDYN--DSVQVVDCGLSLND-TAFEKMIISELVHN------NLRG 836 rSseakrlelekpVkpvigGssSEDdAivlDdAslFnHedslgLELlhke Ss++++lel +pVkpvigGssSEDdAiv+D++sl +H d++gLEL hke KIAA0786 837 -SSKTHNLELTLPVKPVIGGSSSEDDAIVADASSL-MHSDNPGLELHHKE 884 leaPLLppRvySvENHqLYqsdRRRiPkKvKPdeseSfvaeltaeadedl leaPL+p+R++S+ LYq++ kKvK + ++S+v++ltaea+ +l KIAA0786 885 LEAPLIPQRTHSL----LYQPQ-----KKVKSEGTDSYVSQLTAEAEDHL 925 qSPnRDSLYtSmpnLrDsPsypesspetqaEdLsPpppAkcGdeeDiYYk qSPnRDSLYtSmpnLrDsP ypessp+ + EdLsP+++++ +e+ iYYk KIAA0786 926 QSPNRDSLYTSMPNLRDSP-YPESSPD-MEEDLSPSRRSE--NED-IYYK 970 SmPPnLgARnHvHqLqtYYQvsRGssdGYivppnkeGtiPeGSSdvREGq Sm PnLgA+ qLq++YQ+sRG+sdGYi+p+nkeG+iPeG dvREGq KIAA0786 971 SM-PNLGAGH---QLQMCYQISRGNSDGYIIPINKEGCIPEG--DVREGQ 1014 mqLVTSL<-* mqLVTSL KIAA0786 1015 MQLVTSL 1021 //