hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12555825/chunk_1/iprscan-20080502-12555825.nocrc
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Query sequence: KIAA0783
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00249                                                 135.1    7.6e-36   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00249    1/3     332   389 ..     1    39 []    46.8  2.8e-09
SM00249    2/3     451   510 ..     1    39 []    37.3    2e-06
SM00249    3/3     738   788 ..     1    39 []    50.9  1.7e-10

Alignments of top-scoring domains:
SM00249: domain 1 of 3, from 332 to 389: score 46.8, E = 2.8e-09
                   *->yC.vCgk......g.llqCdkgCdrwyHv.Clgpple..........
                      +C vC ++++++ ++++qCd +C+  +H +C+g ++e+++  ++ ++
    KIAA0783   332    ICcVCLGdnsedaDeIIQCD-NCGITVHEgCYGVDGEsdsimssase 377  

                   epdg.wyCprCk<-*
                   + +++w+C+ Ck   
    KIAA0783   378 NSTEpWFCDACK    389  

SM00249: domain 2 of 3, from 451 to 510: score 37.3, E = 2e-06
                   *->yC.vCgk......g.llqCd.kgCdrwyHv.Clgpple.........
                       C++C +++  ++g +++Cd ++C+  +Hv+C++ +++ ++   +++
    KIAA0783   451    ECsFCEDprfartGvCISCDaGMCRAYFHVtCAQKEGLlseaaaeed 497  

                   .epdg.wyCprCk<-*
                    + ++  yC+++    
    KIAA0783   498 iADPFfAYCKQHA    510  

SM00249: domain 3 of 3, from 738 to 788: score 50.9, E = 1.7e-10
                   *->yC.vCgk....g.llqCdkgCdrwyHv.Clgpple.....epdg.wy
                       C++C+k+++ + ll+Cd +C+ +yH++Cl+ppl++ +++ +++ w+
    KIAA0783   738    SCgICKKnhdqHlLLLCD-TCKLHYHLgCLDPPLTrmprkTKNSyWQ 783  

                   CprCk<-*
                   C++C    
    KIAA0783   784 CSECD    788  

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