hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12542014/chunk_1/iprscan-20080502-12542014.nocrc
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Query sequence: KIAA0782
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                 245.6    4.1e-69   5
SM00324                                                 231.4    7.9e-65   1
SM00105                                                  99.6    3.8e-25   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/5     159   252 ..     1    82 []    74.1  1.7e-17
SM00233     2/5     272   362 ..     1    82 []    34.7  1.2e-05
SM00105     1/1     366   492 ..     1   139 []    99.6  3.8e-25
SM00233     3/5     575   683 ..     1    82 []    58.9  6.3e-13
SM00233     4/5     693   787 ..     1    82 []    20.0     0.34
SM00324     1/1     799   975 ..     1   193 []   231.4  7.9e-65
SM00233     5/5    1106  1229 ..     1    82 []    57.9  1.3e-12

Alignments of top-scoring domains:
SM00233: domain 1 of 5, from 159 to 252: score 74.1, E = 1.7e-17
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk...kpkgsipL
                      vik GwL k  ++++  ++kr+++L+++ L y++s ++   k +i++
    KIAA0782   159    VIKAGWLDKNPpqgSyIYQKRWVRLDTDHLRYFDSNkdaYSKRFISV 205  

                   sgc.svre.p..cFeivt.drtlllqAeseeereeWvealqsaiaka<-*
                     ++ v    +  Fe++t++rt+ ++Aes+ er+eW++alq+a+a++   
    KIAA0782   206 ACIsHVAAiGdqKFEVITnNRTFAFRAESDVERKEWMQALQQAMAEQ    252  

SM00233: domain 2 of 5, from 272 to 362: score 34.7, E = 1.2e-05
                   *->vikeGwLlkkskswkkryfvLfngvLlyyksk......kpkgsipLs
                      + + G L  ++    k y+ + ++ + +yk+ ++ + +  + +i++s
    KIAA0782   272    PDRAGSLELRG-FKNKLYVAVVGDKVQLYKNLeeyhlgIGITFIDMS 317  

                   gcsvre.p..cFeivt.drtlllqAeseeereeWvealqsaiaka<-*
                      v+e ++++F ++t+ r + ++A+se e+e+W+ea+q aia+a   
    KIAA0782   318 VGNVKEvDrrSFDLTTpYRIFSFSADSELEKEQWLEAMQGAIAEA    362  

SM00105: domain 1 of 1, from 366 to 492: score 99.6, E = 3.8e-25
                   *->eealqlLRsikpgNkkCfDCGavpnPtWaSvnlGvflCieCSGiHRs
                       e  +++ +   +N++C+DCGa p P+WaS+nl v++C +C+G HR+
    KIAA0782   366    SEVAERIWAAA-PNRFCADCGA-PQPDWASINLCVVICKRCAGEHRG 410  

                   LfGvHiSkVnvRSltLD..tWteeeLrllesckgGNenansfwesnlddf
                   L G  +SkV  RSl++D++ Wte+ ++l++   +GN + n+fw +n+++ 
    KIAA0782   411 L-GAGVSKV--RSLKMDrkVWTETLIELFL--QLGNGAGNRFWAANVPPS 455  

                   slkpkdsdaaasvKCeddrqkyesfiaaKYeeklf.rvdke..saee<-*
                   +   + s+          ++ +     aKY+e + +r++++ +++ee   
    KIAA0782   456 EALQPSSS----------PSTRRCHLEAKYREGKYrRYHPLfgNQEE    492  

SM00233: domain 3 of 5, from 575 to 683: score 58.9, E = 6.3e-13
                   *->vikeGwLlkks...........k.swkkryfvLfngvLlyyksk...
                      v ++G+L+k  + ++  ++++ ++ + +r++vL +gvL+y+++++  
    KIAA0782   575    VSHSGFLYKTAsagkllqdrraReEFSRRWCVLGDGVLSYFENErav 621  

                   kpkgsipLsgcsvre.p.........cFeivt.dr.tlllqAeseeeree
                   +p g+i  s++ +   p+++ ++ +++Fe++t++++ +l+  es+e+++e
    KIAA0782   622 TPNGEIRASEIVCLAvPppdthgfehTFEVYTeGErLYLFGLESAEQAHE 671  

                   Wvealqsaiaka<-*
                   Wv+++ +a  +    
    KIAA0782   672 WVKCIAKAFVPP    683  

SM00233: domain 4 of 5, from 693 to 787: score 20.0, E = 0.34
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk.kpkgsipLsg
                      +++ G L  k + ++++ ++ +f L ++ L    +++ + +++ L++
    KIAA0782   693    FERLGRLPYKAglsLqRAQEGWFSLSGSELRAVFPEgPCEEPLQLRK 739  

                   c.svre.p.....cFeivt.drtlllqAeseeereeWvealqsaiaka<-
                   +++++ + ++++ ++ +v + rtl++q e   ++  W+ a+q+a+a+   
    KIAA0782   740 LqELSIqGdsenqVLVLVErRRTLYIQGERRLDFMGWLGAIQKAAASM   787  

                   *
                    
    KIAA0782     -   -    

SM00324: domain 1 of 1, from 799 to 975: score 231.4, E = 7.9e-65
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      s+iP iv++C++y+ ++Gl+ eGIYR++G++s++++L+e+++++  +
    KIAA0782   799    SDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARs 845  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +            + ++e+ v dv+++LK++LR+LP+ L+t+++   ++e
    KIAA0782   846 V-----------HLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTWLE 884  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                   a+++              edeee++ ++rell +LPp+nrat ++L++HL
    KIAA0782   885 ASEI--------------EDEEEKVSRYRELLVRLPPVNRATVKALIsHL 920  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.......ltdikhqnkvvetl
                   ++V+++s+ N M+++NLAivFgPtL++ ++++ + + +  +++n++v ++
    KIAA0782   921 YCVQCFSDTNQMNVHNLAIVFGPTLFQTDgqdykagRVVEDLINHYVVVF 970  

                   ienad<-*
                    ++++   
    KIAA0782   971 SVDEE    975  

SM00233: domain 5 of 5, from 1106 to 1229: score 57.9, E = 1.3e-12
                   *->vikeGwLlkks..........k.swkkryfvLfngvLlyyksk....
                       +k+G ++ +++++  + + +++++++ryf+L +++L +yk+ ++++
    KIAA0782  1106    DTKHGMMKFREdrsllglglpSgGFHDRYFILNSSCLRLYKEVrsqr 1152 

                   ..........kpkgsipLsgcsvre.p..........cFeivt.dr....
                   + ++ ++++++p ++ p+++++v+ +++++ +++   +F++v++++++++
    KIAA0782  1153 pwsgapetshRPEKEWPIKSLKVYLgVkkklrpptcwGFTVVHeTEkhek 1202 

                   .tlllqAeseeereeWvealqsaiaka<-*
                   + ++l+++++ e++eW++ +  ++++    
    KIAA0782  1203 qQWYLCCDTQMELREWFATFLFVQHDG    1229 

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