hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-12524313/chunk_1/iprscan-20080502-12524313.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0781 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00220 353.4 1.5e-101 1 SM00219 89.6 3.6e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00219 1/1 44 295 .. 1 280 [] 89.6 3.6e-22 SM00220 1/1 44 295 .. 1 231 [] 353.4 1.5e-101 Alignments of top-scoring domains: SM00219: domain 1 of 1, from 44 to 295: score 89.6, E = 3.6e-22 *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr + +LG G+F +V +G+ + +++eVA+K + ++ + ++e ++r KIAA0781 44 YDIEGTLGKGNFAVVKLGRHRitkTEVAIKIIDKSQldavnLEKIYR 90 EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy E +iMk+l +Hp+i+kL+ v ++ l++v+Ey+++G dy KIAA0781 91 EVQIMKML--DHPHIIKLYQVMETK-------SMLYLVTEYAKNGEIFDY 131 LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvv L ++++ l+ s+ +QI + +Y + +++vHRDL A N L+++n + KIAA0781 132 LANHGR-LNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNI 180 KIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdgk KI+DFG + +++ + + +g P+ APE++ KIAA0781 181 KIADFGFGNFFKSG-------ELLATW---CGS--PPYA--APEVFEGQQ 216 F.tskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlp ++ ++ D+WS GV+L+ ++ G+ P g + +++++ +G+ + KIAA0781 217 YeGPQLDIWSMGVVLY-VLVCGALPFDG-----PTLPILRQRVLEGRFRI 260 kPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-* + +++ l+++ dP++R t +++++++ + KIAA0781 261 PYFM---------SEDCEHLIRRMLVLDPSKRLTIAQIkeHKWM 295 SM00220: domain 1 of 1, from 44 to 295: score 353.4, E = 1.5e-101 *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr Y++ +lGkG F++V+l+r++ t+ +vAiK+i++++ + + e+i+r KIAA0781 44 YDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDksqldavnlEKIYR 90 EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr E++i+k+ dHP+I+kLy v+e+++ lylV+Ey+ + G+ fd+l ++gr KIAA0781 91 EVQIMKMlDHPHIIKLYQVMETkSMLYLVTEYAKN--GEIFDYLANHGR- 137 glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvKl l+E+ear+ f+Qilsa++Y+H ++I+HRDLK eN+LLd++ ++K+ KIAA0781 138 -----LNEsEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNnmNIKI 182 aDFGlArql......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcily aDFG+ ++++++ t +G+p Y APEv+++++Y +p DiWS G++ly KIAA0781 183 ADFGFGNFFksgellATWCGSPPYAAPEVFegqQYEGPQLDIWSMGVVLY 232 ElltGkpPFp..qldlifkkig..........SpeakdLikklLvkdPek l++G PF++++l + +++++++ + ++ S+++ +Li+++Lv dP+k KIAA0781 233 VLVCGALPFDgpTLPILRQRVLegrfripyfmSEDCEHLIRRMLVLDPSK 282 Rlta.eaLedeldikaHPff<-* Rlt+ ++ e H ++ KIAA0781 283 RLTIaQIKE-------HKWM 295 //