hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-12473653/chunk_1/iprscan-20080502-12473653.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0778 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00122.10.fs E1-E2 ATPase 388.5 1.5e-117 1 PF00122.10.ls E1-E2 ATPase 390.4 2.5e-114 1 PF00689.11.ls Cation transporting ATPase, C-terminu 257.8 2e-74 1 PF00689.11.fs Cation transporting ATPase, C-terminu 255.9 7.6e-74 1 PF00690.16.fs Cation transporter/ATPase, N-terminus 127.5 6.8e-36 1 PF00690.16.ls Cation transporter/ATPase, N-terminus 129.5 8.8e-36 1 PF00702.16.fs haloacid dehalogenase-like hydrolase 70.5 7.8e-20 2 PF00702.16.ls haloacid dehalogenase-like hydrolase 65.0 2.3e-16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00690.16.fs 1/1 60 143 .. 1 87 [] 127.5 6.8e-36 PF00690.16.ls 1/1 60 143 .. 1 87 [] 129.5 8.8e-36 PF00122.10.ls 1/1 162 393 .. 1 245 [] 390.4 2.5e-114 PF00122.10.fs 1/1 162 393 .. 1 245 [] 388.5 1.5e-117 PF00702.16.ls 1/1 397 764 .. 1 183 [] 65.0 2.3e-16 PF00702.16.fs 1/2 397 659 .. 1 111 [. 28.7 7.1e-08 PF00702.16.fs 2/2 713 764 .. 128 183 .] 41.8 1.3e-11 PF00689.11.ls 1/1 860 1038 .. 1 197 [] 257.8 2e-74 PF00689.11.fs 1/1 860 1038 .. 1 197 [] 255.9 7.6e-74 Alignments of top-scoring domains: PF00690.16.fs: domain 1 of 1, from 60 to 143: score 127.5, E = 6.8e-36 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe +elkkev++d+hkl+++e+ +k+++d+++GL+ + a++ l+++GpN+ KIAA0778 60 DELKKEVAMDDHKLSLDELGRKYQVDLSKGLTNQRAQDVLARDGPNA 106 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* L+p+++t++w+kf++Q+++++++lL+++Ai++ f+++g KIAA0778 107 LTPPPTTPEWVKFCRQLFGGFSILLWIGAILC---FLAYG 143 PF00690.16.ls: domain 1 of 1, from 60 to 143: score 129.5, E = 8.8e-36 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe +elkkev++d+hkl+++e+ +k+++d+++GL+ + a++ l+++GpN+ KIAA0778 60 DELKKEVAMDDHKLSLDELGRKYQVDLSKGLTNQRAQDVLARDGPNA 106 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* L+p+++t++w+kf++Q+++++++lL+++Ai++ f+++g KIAA0778 107 LTPPPTTPEWVKFCRQLFGGFSILLWIGAILC---FLAYG 143 PF00122.10.ls: domain 1 of 1, from 162 to 393: score 390.4, E = 2.5e-114 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei v++++v++++++++yqe++++k+++++k++vp++A V+R+G + +i KIAA0778 162 VLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREG-EKMQI 207 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs +aee+v+GD+Vevk GdrVPAD+r++++++ +kVD+S+LTGES+P+++ s KIAA0778 208 NAEEVVVGDLVEVKGGDRVPADLRIISSHG-CKVDNSSLTGESEPQTR-S 255 dvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeAq +++t++nple++n++f++T++v+G+++g+V+atGd+T++g+Ia+L ++ + KIAA0778 256 PEFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLE 305 ssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegll ++tP+ ++++f + +t v+++l+v +f++ l++ g+swle KIAA0778 306 VGRTPIAMEIEHFIQLITGVAVFLGVSFFVLSLIL------GYSWLE--- 346 yalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt<- a+if+++++Va++PegL ++vtv+l+l+++rmA+k++LVK+l+AvEt KIAA0778 347 -AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 393 * KIAA0778 - - PF00122.10.fs: domain 1 of 1, from 162 to 393: score 388.5, E = 1.5e-117 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei v++++v++++++++yqe++++k+++++k++vp++A V+R+G + +i KIAA0778 162 VLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREG-EKMQI 207 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs +aee+v+GD+Vevk GdrVPAD+r++++++ +kVD+S+LTGES+P+++ s KIAA0778 208 NAEEVVVGDLVEVKGGDRVPADLRIISSHG-CKVDNSSLTGESEPQTR-S 255 dvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeAq +++t++nple++n++f++T++v+G+++g+V+atGd+T++g+Ia+L ++ + KIAA0778 256 PEFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLE 305 ssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegll ++tP+ ++++f + +t v+++l+v +f++ l++ g+swle KIAA0778 306 VGRTPIAMEIEHFIQLITGVAVFLGVSFFVLSLIL------GYSWLE--- 346 yalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt<- a+if+++++Va++PegL ++vtv+l+l+++rmA+k++LVK+l+AvEt KIAA0778 347 -AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 393 * KIAA0778 - - PF00702.16.ls: domain 1 of 1, from 397 to 764: score 65.0, E = 2.3e-16 *->ikavvFDkDGTLtdgk............................... + +++ Dk+GTLt+ + + + +++ ++ ++++++++ + +++++ KIAA0778 397 TSTICSDKTGTLTQNRmtvahmwfdnqiheadttedqsgatfdkrsp 443 ....eppiaeaiveaaaelgl.............lpleevekllgrgl.g + + ia +++a ++g ++ + +++++ +++++ ++ k+++ ++ KIAA0778 444 twtaLSRIAGLCNRAVFKAGQenisvskrdtagdASESALLKCIELSCgS 493 erilleggltaell.................................... +r++ + + + +++ +++++ + +++++++ ++ ++ +++ ++ KIAA0778 494 VRKMRDRNPKVAEIpfnstnkyqlsiheredspqshvlvmkgaperildr 543 .................................................. ++ +++ + +++ + + + ++ +++ + + ++++ ++ KIAA0778 544 cstilvqgkeipldkemqdafqnaymelgglgervlgfcqlnlpsgkfpr 593 ..............d.evlglial.dklypgarealkaLkrrGikvailT + + ++++ + +++ +++gl d+++ +++a+ +++++Gikv+++T KIAA0778 594 gfkfdtdelnfpteKlCFVGLMSMiDPPRAAVPDAVGKCRSAGIKVIMVT 643 ggdr.naeallealgla.lfdviidsdevggvgpivvgKPkpeifllale g+++ +a+a +a+ +++i + e+ + ++ KIAA0778 644 GDHPiTAKA------IAkGVGIISEGNETV---------------EDIAA 672 rlgvkpeevg........................................ rl+++ ++v++++ + ++++ ++ ++++ ++ +++++ +++++ KIAA0778 673 RLNIPMSQVNpreakacvvhgsdlkdmtseqldeilknhteivfartspq 722 ............pe.vlmVGDgvnDapalaaAGvgvamgngg<-* ++ ++ ++++ v++ GDgvnD pal++A++g+amg +g KIAA0778 723 qkliivegcqrqGAiVAVTGDGVNDSPALKKADIGIAMGISG 764 PF00702.16.fs: domain 1 of 2, from 397 to 659: score 28.7, E = 7.1e-08 *->ikavvFDkDGTLtdgk............................... + +++ Dk+GTLt+ + + + +++ ++ ++++++++ + +++++ KIAA0778 397 TSTICSDKTGTLTQNRmtvahmwfdnqiheadttedqsgatfdkrsp 443 ....eppiaeaiveaaaelgl.............lpleevekllgrgl.g + + ia +++a ++g ++ + +++++ +++++ ++ k+++ ++ KIAA0778 444 twtaLSRIAGLCNRAVFKAGQenisvskrdtagdASESALLKCIELSCgS 493 erilleggltaell.................................... +r++ + + + +++ +++++ + +++++++ ++ ++ +++ ++ KIAA0778 494 VRKMRDRNPKVAEIpfnstnkyqlsiheredspqshvlvmkgaperildr 543 .................................................. ++ +++ + +++ + + + ++ +++ + + ++++ ++ KIAA0778 544 cstilvqgkeipldkemqdafqnaymelgglgervlgfcqlnlpsgkfpr 593 ..............d.evlglial.dklypgarealkaLkrrGikvailT + + ++++ + +++ +++gl d+++ +++a+ +++++Gikv+++T KIAA0778 594 gfkfdtdelnfpteKlCFVGLMSMiDPPRAAVPDAVGKCRSAGIKVIMVT 643 ggdr.naeallealgl<-* g+++ +a+a+++ g+ KIAA0778 644 GDHPiTAKAIAKGVGI 659 PF00702.16.fs: domain 2 of 2, from 713 to 764: score 41.8, E = 1.3e-11 *->pivvgKPkpeifllalerlgvkpeevgpevlmVGDgvnDapalaaAG +iv+++ +p+ +l ++e ++ +++ v ++ GDgvnD pal++A+ KIAA0778 713 EIVFARTSPQQKLIIVEGCQRQGAIV----AVTGDGVNDSPALKKAD 755 vgvamgngg<-* +g+amg +g KIAA0778 756 IGIAMGISG 764 PF00689.11.ls: domain 1 of 1, from 860 to 1038: score 257.8, E = 2e-74 *->RpPRnpk.DeliitgllffrylviGvivavatlaaFvwwfygggenG R+PRn ++D+l++++l++++y +iG+i+a+++ F+++f++ +enG KIAA0778 860 RQPRNSQtDKLVNERLISMAYGQIGMIQALGG---FFTYFVILAENG 903 idfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFt f+P+ l+g++ +w++ + ndleds+ gqew++++rk +ef+++T++F+ KIAA0778 904 --FLPSRLLGIRLDWDDRTMNDLEDSY-GQEWTYEQRKVVEFTCHTAFFA 950 vlVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsl ++Vv+q+++ +++c+++ rnS+fq+g ++Nk+L++++ ++ KIAA0778 951 SIVVVQWAD---LIICKTR-------RNSVFQQG--MKNKILIFGLLEET 988 alqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRr al++++ Y+Pg+ ++ +++l++++W++++p s+l+fi+dE+rK+i Rr KIAA0778 989 ALAAFLSYCPGMGVALR-MYPLKVTWWFCAFPYSLLIFIYDEVRKLILRR 1037 r<-* + KIAA0778 1038 Y 1038 PF00689.11.fs: domain 1 of 1, from 860 to 1038: score 255.9, E = 7.6e-74 *->RpPRnpk.DeliitgllffrylviGvivavatlaaFvwwfygggenG R+PRn ++D+l++++l++++y +iG+i+a+++ F+++f++ +enG KIAA0778 860 RQPRNSQtDKLVNERLISMAYGQIGMIQALGG---FFTYFVILAENG 903 idfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFt f+P+ l+g++ +w++ + ndleds+ gqew++++rk +ef+++T++F+ KIAA0778 904 --FLPSRLLGIRLDWDDRTMNDLEDSY-GQEWTYEQRKVVEFTCHTAFFA 950 vlVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsl ++Vv+q+++ +++c+++ rnS+fq+g ++Nk+L++++ ++ KIAA0778 951 SIVVVQWAD---LIICKTR-------RNSVFQQG--MKNKILIFGLLEET 988 alqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRr al++++ Y+Pg+ ++ +++l++++W++++p s+l+fi+dE+rK+i Rr KIAA0778 989 ALAAFLSYCPGMGVALR-MYPLKVTWWFCAFPYSLLIFIYDEVRKLILRR 1037 r<-* + KIAA0778 1038 Y 1038 //