hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12354033/chunk_1/iprscan-20080502-12354033.nocrc
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Query sequence: KIAA0771
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00023.20.ls Ankyrin repeat                                  78.2    2.3e-20   2
PF00023.20.fs Ankyrin repeat                                  74.2      1e-19   2
PF00018.18.fs SH3 domain                                      58.7    2.8e-15   1
PF00018.18.ls SH3 domain                                      60.7    4.6e-15   1
PF07653.7.fs Variant SH3 domain                              33.8    4.2e-09   1
PF07653.7.ls Variant SH3 domain                              35.6    1.5e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00023.20.fs   1/2     778   810 ..     1    33 []    41.4  1.5e-10
PF00023.20.ls   1/2     778   810 ..     1    33 []    43.4  7.2e-10
PF00023.20.ls   2/2     811   843 ..     1    33 []    34.9  2.7e-07
PF00023.20.fs   2/2     811   843 ..     1    33 []    32.9  3.5e-08
PF00018.18.fs   1/1     880   937 ..     1    59 []    58.7  2.8e-15
PF00018.18.ls   1/1     880   937 ..     1    59 []    60.7  4.6e-15
PF07653.7.ls   1/1     881   937 ..     1    69 []    35.6  1.5e-07
PF07653.7.fs   1/1     881   937 ..     1    69 []    33.8  4.2e-09

Alignments of top-scoring domains:
PF00023.20.fs: domain 1 of 2, from 778 to 810: score 41.4, E = 1.5e-10
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G TPLH A++ g++ +vk+Ll+ G ++na d    
    KIAA0771   778    EGITPLHNAVCAGHHHIVKFLLDFGVNVNAADS    810  

PF00023.20.ls: domain 1 of 2, from 778 to 810: score 43.4, E = 7.2e-10
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G TPLH A++ g++ +vk+Ll+ G ++na d    
    KIAA0771   778    EGITPLHNAVCAGHHHIVKFLLDFGVNVNAADS    810  

PF00023.20.ls: domain 2 of 2, from 811 to 843: score 34.9, E = 2.7e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      dG+TPLH+Aa+++++ ++k L++ GA + a +    
    KIAA0771   811    DGWTPLHCAASCNSVHLCKQLVESGAAIFASTI    843  

PF00023.20.fs: domain 2 of 2, from 811 to 843: score 32.9, E = 3.5e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      dG+TPLH+Aa+++++ ++k L++ GA + a +    
    KIAA0771   811    DGWTPLHCAASCNSVHLCKQLVESGAAIFASTI    843  

PF00018.18.fs: domain 1 of 1, from 880 to 937: score 58.7, E = 2.8e-15
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd..pgWWkgrlkgtg
                       ++ AL DYea++sdELsF +GD +t+l ++d+++ +WW +rl    
    KIAA0771   880    GVAYALWDYEAQNSDELSFHEGDALTILRRKDEseTEWWWARLG--- 923  

                   GkeGliPsNYVepv<-*
                   ++eG++P N + ++   
    KIAA0771   924 DREGYVPKNLLGLY    937  

PF00018.18.ls: domain 1 of 1, from 880 to 937: score 60.7, E = 4.6e-15
                   *->kkvvALYDYearesdELsFkkGDvitvleksdd..pgWWkgrlkgtg
                       ++ AL DYea++sdELsF +GD +t+l ++d+++ +WW +rl    
    KIAA0771   880    GVAYALWDYEAQNSDELSFHEGDALTILRRKDEseTEWWWARLG--- 923  

                   GkeGliPsNYVepv<-*
                   ++eG++P N + ++   
    KIAA0771   924 DREGYVPKNLLGLY    937  

PF07653.7.ls: domain 1 of 1, from 881 to 937: score 35.6, E = 1.5e-07
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskdddgwwe
                      ++ a+ dy+a ++ +e      Ls+++Gd + ++ ++++++  +ww+
    KIAA0771   881    VAYALWDYEA-QNSDE------LSFHEGDALTIL-RRKDESETEWWW 919  

                   geslggGrrrRGlvPssaveel<-*
                   +++  g r+  G+vP +++  +   
    KIAA0771   920 ARL--GDRE--GYVPKNLLGLY    937  

PF07653.7.fs: domain 1 of 1, from 881 to 937: score 33.8, E = 4.2e-09
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskdddgwwe
                      ++ a+ dy+a ++ +e      Ls+++Gd + ++ ++++++  +ww+
    KIAA0771   881    VAYALWDYEA-QNSDE------LSFHEGDALTIL-RRKDESETEWWW 919  

                   geslggGrrrRGlvPssaveel<-*
                   +++  g r+  G+vP +++  +   
    KIAA0771   920 ARL--GDRE--GYVPKNLLGLY    937  

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