hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12321590/chunk_1/iprscan-20080502-12321590.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0769
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00326                                                 148.9    5.1e-40   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/2     478   535 ..     1    58 []    62.9  4.1e-14
SM00326    2/2     576   634 ..     1    58 []    86.0  4.4e-21

Alignments of top-scoring domains:
SM00326: domain 1 of 2, from 478 to 535: score 62.9, E = 4.1e-14
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks.ddgWweGelnrtGke
                       +++++Y+y+a+++dEL++++ ++++v+e+ + ++W +++++  G++
    KIAA0769   478    LTCKVVYSYKASQPDELTIEEHEVLEVIEDGdMEDWVKARNK-VGQV 523  

                   GlfPsnYVeeie<-*
                   G++P  Y++  +   
    KIAA0769   524 GYVPEKYLQFPT    535  

SM00326: domain 2 of 2, from 576 to 634: score 86.0, E = 4.4e-21
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks...ddgWweGelnrtG
                      ++v+AlYDye+q++dELsF +G ii++l+k++++ddg weGe n  G
    KIAA0769   576    CFVKALYDYEGQTDDELSFPEGAIIRILNKEnqdDDGFWEGEFN--G 620  

                   keGlfPsnYVeeie<-*
                   ++G fPs  Vee+    
    KIAA0769   621 RIGVFPSVLVEELS    634  

//