hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12132574/chunk_1/iprscan-20080502-12132574.nocrc
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Query sequence: KIAA0758
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00303                                                  84.3    1.5e-20   1
SM00409                                                  62.0    7.7e-14   2
SM00408                                                  44.7    1.3e-08   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00409    1/2     302   392 ..     1    58 []    35.8  5.7e-06
SM00408    1/2     308   381 ..     1    56 []    34.3  1.6e-05
SM00409    2/2     501   587 ..     1    58 []    26.1   0.0047
SM00408    2/2     507   576 ..     1    56 []    10.3     0.47
SM00303    1/1     974  1026 ..     1    51 []    84.3  1.5e-20

Alignments of top-scoring domains:
SM00409: domain 1 of 2, from 302 to 392: score 35.8, E = 5.7e-06
                   *->pp.vtvkeGesvtLtC.as....titWy...................
                        +    eG++v+L C+ +  +++++W+   ++   +++++ +  + 
    KIAA0758   302    VTpEIIFEGDTVSLVCeKEvlssNVSWRyeeqqleiqnssrfsiyta 348  

                   ..........LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<
                     ++ ++ ++LtI+n+tp D+   G+Y+C    +  ++++    ++ V  
    KIAA0758   349 lfnnmtsvskLTIhNITPGDA---GEYVCKLIldIFEYEC--KKKIDVM  392  

                   -*
                     
    KIAA0758     -    -    

SM00408: domain 1 of 2, from 308 to 381: score 34.3, E = 1.6e-05
                   *->leGqsVtLtCpasgdpvpnItWlk.gkplp.................
                       eG++V+L C+       n++W++++++l+ +++++ +  +   ++ 
    KIAA0758   308    FEGDTVSLVCE-KEVLSSNVSWRYeEQQLEiqnssrfsiytalfnnm 353  

                   .sgstLtiknvsleDsGlYtCvArNsvg<-*
                   +s s Lti n++++D+G+Y+C+    +    
    KIAA0758   354 tSVSKLTIHNITPGDAGEYVCKLILDIF    381  

SM00409: domain 2 of 2, from 501 to 587: score 26.1, E = 0.0047
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                      p +++v+eG++ +++C    ++ ++++W ++ + +  ++  ++++  
    KIAA0758   501    PDpISVSEGQNFSIKCiSDvsnydEVYWNtsagikiyqrfyttrryl 547  

                   ......LtI.nvtpeDsesgGtYtCaat.sgsasseqgttLtVl<-*
                   ++  + Lt++  t+e     GtY C  + + s+s   +  ++V+   
    KIAA0758   548 dgaesvLTVkTSTREWN---GTYHCIFRyKNSYSI-ATKDVIVH    587  

SM00408: domain 2 of 2, from 507 to 576: score 10.3, E = 0.47
                   *->leGqsVtLtCpasgdpvpnItWlk..gkplp............sgst
                       eGq+++++C+ + +   ++ W  + g ++ ++  ++++  ++ +s 
    KIAA0758   507    SEGQNFSIKCISDVSNYDEVYWNTsaGIKIYqrfyttrryldgAESV 553  

                   LtiknvsleDsGlYtCvArNsvg<-*
                   Lt+k  ++e  G+Y+C+ r +++   
    KIAA0758   554 LTVKTSTREWNGTYHCIFRYKNS    576  

SM00303: domain 1 of 1, from 974 to 1026: score 84.3, E = 1.5e-20
                   *->snpiCvfWdese...tgeWstrGCelvetnkpthttCsCnHLTsFAv
                      ++++CvfW+ +  ++tg+W+++GC+++e+++  ++tC+C+HLTsF++
    KIAA0758   974    GETKCVFWNFRLannTGGWDSSGCYVEEGDG-DNVTCICDHLTSFSI 1019 

                   Lmdvspn<-*
                   Lm + ++   
    KIAA0758  1020 LMSPDSP    1026 

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