hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-12132574/chunk_1/iprscan-20080502-12132574.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0758 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01825.11.fs Latrophilin/CL-1-like GPS domain 80.7 3e-23 1 PF01825.11.ls Latrophilin/CL-1-like GPS domain 82.7 1.1e-21 1 PF00002.15.fs 7 transmembrane receptor (Secretin family) 56.0 4.4e-16 1 PF01390.10.fs SEA domain 53.9 1.7e-14 1 PF01390.10.ls SEA domain 55.8 1.3e-13 1 PF00002.15.ls 7 transmembrane receptor (Secretin family) 48.8 6.8e-13 1 PF00047.15.fs Immunoglobulin domain 41.9 9.8e-11 2 PF00047.15.ls Immunoglobulin domain 45.8 1.4e-10 2 PF07686.7.fs Immunoglobulin V-set domain 20.3 2.8e-05 2 PF07686.7.ls Immunoglobulin V-set domain 17.2 0.0009 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF01390.10.fs 1/1 191 290 .. 1 120 [] 53.9 1.7e-14 PF01390.10.ls 1/1 191 290 .. 1 120 [] 55.8 1.3e-13 PF07686.7.ls 1/2 297 392 .. 1 141 [] 14.0 0.0019 PF00047.15.ls 1/2 310 376 .. 1 65 [] 27.2 5.5e-05 PF00047.15.fs 1/2 310 376 .. 1 65 [] 25.2 3.6e-06 PF00047.15.fs 2/2 509 571 .. 1 65 [] 16.7 0.00081 PF00047.15.ls 2/2 509 571 .. 1 65 [] 18.6 0.021 PF01825.11.ls 1/1 974 1021 .. 1 48 [] 82.7 1.1e-21 PF01825.11.fs 1/1 974 1021 .. 1 48 [] 80.7 3e-23 PF00002.15.ls 1/1 1033 1297 .. 1 293 [] 48.8 6.8e-13 PF00002.15.fs 1/1 1080 1297 .. 42 293 .] 56.0 4.4e-16 Alignments of top-scoring domains: PF01390.10.fs: domain 1 of 1, from 191 to 290: score 53.9, E = 1.7e-14 *->pktqvftgsfkitndgelqysedLedpsSqeyqelardiesqlneif + ++++++++++ + + edL + sS+ y+ +++d+e ++++ + KIAA0758 191 QEDVTLNMRVRLN----VGFQEDLMNTSSALYRSYKTDLETAFRKGY 233 rkSslkpgyvgglrvevikfrpekekdngsvvvdydvifrptteapavdk + +pg++g v v++f +gsvvv y+v+ t++ ++ KIAA0758 234 GI---LPGFKG---VTVTGFK------SGSVVVTYEVKT--TPPSL-ELI 268 eelseellqalrnqsgnlkidss<-* +++ e+ q+l+++ + ++ +s+ KIAA0758 269 HKANEQVVQSLNQT-YKMDYNSF 290 PF01390.10.ls: domain 1 of 1, from 191 to 290: score 55.8, E = 1.3e-13 *->pktqvftgsfkitndgelqysedLedpsSqeyqelardiesqlneif + ++++++++++ + + edL + sS+ y+ +++d+e ++++ + KIAA0758 191 QEDVTLNMRVRLN----VGFQEDLMNTSSALYRSYKTDLETAFRKGY 233 rkSslkpgyvgglrvevikfrpekekdngsvvvdydvifrptteapavdk + +pg++g v v++f +gsvvv y+v+ t++ ++ KIAA0758 234 GI---LPGFKG---VTVTGFK------SGSVVVTYEVKT--TPPSL-ELI 268 eelseellqalrnqsgnlkidss<-* +++ e+ q+l+++ + ++ +s+ KIAA0758 269 HKANEQVVQSLNQT-YKMDYNSF 290 PF07686.7.ls: domain 1 of 2, from 297 to 392: score 14.0, E = 0.0019 *->qsqvtqepprWGLLLASLfWptsvtvaeGgsvtLpCtysGtfddsss +s+ +p+ + eG++v+L C KIAA0758 297 ESNFFV-TPE--------------IIFEGDTVSLVCEKE-------- 320 ssgtfsiyWyrq.qppgkgpeliiisyysyystsegngtvgerfkgrvtl + ++ +++W + +q++ ++s++ + ++ f++ +++ KIAA0758 321 VLSS-NVSWRYEeQQL-------------EIQNSSRFSIYTALFNNMTSV 356 sgnpskgdfsLtIsnlqlsDsGtYyCavsnsnelvfgggtrLtVl<-* s LtI+n+++ D G Y C + + +++ + V+ KIAA0758 357 SK--------LTIHNITPGDAGEYVCKLIL-DIFEYECKKKIDVM 392 PF00047.15.ls: domain 1 of 2, from 310 to 376: score 27.2, E = 5.5e-05 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G++v+L+C+ + +v+W+ + ++l+ +++++s + + KIAA0758 310 GDTVSLVCEK---EVLSSNVSWRYEEQqLEiQNSSRFSIYTALFNNM 353 t...sLtitnvtpeDggtYtCvv<-* t+ + Lti+n+tp+D+g+Y C KIAA0758 354 TsvsKLTIHNITPGDAGEYVCKL 376 PF00047.15.fs: domain 1 of 2, from 310 to 376: score 25.2, E = 3.6e-06 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G++v+L+C+ + +v+W+ + ++l+ +++++s + + KIAA0758 310 GDTVSLVCEK---EVLSSNVSWRYEEQqLEiQNSSRFSIYTALFNNM 353 t...sLtitnvtpeDggtYtCvv<-* t+ + Lti+n+tp+D+g+Y C KIAA0758 354 TsvsKLTIHNITPGDAGEYVCKL 376 PF00047.15.fs: domain 2 of 2, from 509 to 571: score 16.7, E = 0.00081 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G+ +++ C + + +v+W + ++ +t+ ++ ++ + KIAA0758 509 GQNFSIKCIS--DVSNYDEVYWNTSAGiKIyQRFYTTRRYLDGAESV 553 tsLtitnvtpeDggtYtCvv<-* Lt++ t+e +gtY C KIAA0758 554 --LTVKTSTREWNGTYHCIF 571 PF00047.15.ls: domain 2 of 2, from 509 to 571: score 18.6, E = 0.021 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G+ +++ C + + +v+W + ++ +t+ ++ ++ + KIAA0758 509 GQNFSIKCIS--DVSNYDEVYWNTSAGiKIyQRFYTTRRYLDGAESV 553 tsLtitnvtpeDggtYtCvv<-* Lt++ t+e +gtY C KIAA0758 554 --LTVKTSTREWNGTYHCIF 571 PF01825.11.ls: domain 1 of 1, from 974 to 1021: score 82.7, E = 1.1e-21 *->snptCvfWdese.ggqGgWstdGCqlgvssndthttClCnHLTsFAv ++++CvfW++ + + GgW+++GC++ ++++ ++tC C+HLTsF++ KIAA0758 974 GETKCVFWNFRLaNNTGGWDSSGCYV-EEGDGDNVTCICDHLTSFSI 1019 Lm<-* Lm KIAA0758 1020 LM 1021 PF01825.11.fs: domain 1 of 1, from 974 to 1021: score 80.7, E = 3e-23 *->snptCvfWdese.ggqGgWstdGCqlgvssndthttClCnHLTsFAv ++++CvfW++ + + GgW+++GC++ ++++ ++tC C+HLTsF++ KIAA0758 974 GETKCVFWNFRLaNNTGGWDSSGCYV-EEGDGDNVTCICDHLTSFSI 1019 Lm<-* Lm KIAA0758 1020 LM 1021 PF00002.15.ls: domain 1 of 1, from 1033 to 1297: score 48.8, E = 6.8e-13 *->lllLkviytVGyslSLvaLllAiai.fllFRkLhCtR.NyI.Hl... lL +i +VG + S+ +L+ +++++ + +++ +R++y +H+ KIAA0758 1033 GILLDIISYVGVGFSILSLAACLVVeAVVWKSVTKNRtSYMrHTciv 1079 NLfaSfiLraisflikdavlfnsvglseadqlsweeslhcsasagki.tm N aS++++++ f++ a +n + i KIAA0758 1080 NIAASLLVANTWFIVVAAIQDNRY----------------------IlCK 1107 .ivvVgCkvvavflhYfflaNFfWmLvEGlYL.htLlvvtVevffserky ++ C ++++f h+f+l+ FfWmL+ Gl L ++L++ +++ r+ KIAA0758 1108 tA----CVAATFFIHFFYLSVFFWMLTLGLMLfYRLVFIL---HETSRST 1150 lwwY.lliGWGvPavf.VgiWaivrpdkagygnegCCWlsnedngyfwWi + +++G+G P+ ++V++ +++p+ +y ++ CWl+ +++ + KIAA0758 1151 QKAIaFCLGYGCPLAIsVITLGATQPRE-VYTRKNVCWLNW-EDTKALLA 1198 ikGPvllvilvNfilFinilriLvqKlrid.slspdmgetdqyrkkrlaK ++ P+l +++vN+ + i ++ + ++ +d++++++ +++ q++ K KIAA0758 1199 FAIPALIIVVVNITITIVVITKILRPSIGDkPCKQEKSSLFQIS-----K 1243 StLlLlPLLGitwvlflfapeddarGvssivflylflilnSfQGFfVavl S +L PLLG+tw ++l + + + vf+ +f+iln fQG+f+ ++ KIAA0758 1244 SIGVLTPLLGLTWGFGLTTVFPG----TNLVFHIIFAILNVFQGLFILLF 1289 YCFLNgEV<-* C+ +V KIAA0758 1290 GCLWDLKV 1297 PF00002.15.fs: domain 1 of 1, from 1080 to 1297: score 56.0, E = 4.4e-16 *->NLfaSfiLraisflikdavlfnsvglseadqlsweeslhcsasagki N aS++++++ f++ a +n + i KIAA0758 1080 NIAASLLVANTWFIVVAAIQDNRY----------------------I 1104 .tm.ivvVgCkvvavflhYfflaNFfWmLvEGlYL.htLlvvtVevffse ++ C ++++f h+f+l+ FfWmL+ Gl L ++L++ +++ KIAA0758 1105 lCKtA----CVAATFFIHFFYLSVFFWMLTLGLMLfYRLVFIL---HETS 1147 rkylwwY.lliGWGvPavf.VgiWaivrpdkagygnegCCWlsnedngyf r+ + +++G+G P+ ++V++ +++p+ +y ++ CWl+ +++ KIAA0758 1148 RSTQKAIaFCLGYGCPLAIsVITLGATQPRE-VYTRKNVCWLNW-EDTKA 1195 wWiikGPvllvilvNfilFinilriLvqKlrid.slspdmgetdqyrkkr + ++ P+l +++vN+ + i ++ + ++ +d++++++ +++ q++ KIAA0758 1196 LLAFAIPALIIVVVNITITIVVITKILRPSIGDkPCKQEKSSLFQIS--- 1242 laKStLlLlPLLGitwvlflfapeddarGvssivflylflilnSfQGFfV KS +L PLLG+tw ++l + + + vf+ +f+iln fQG+f+ KIAA0758 1243 --KSIGVLTPLLGLTWGFGLTTVFPG----TNLVFHIIFAILNVFQGLFI 1286 avlYCFLNgEV<-* ++ C+ +V KIAA0758 1287 LLFGCLWDLKV 1297 //