hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11440864/chunk_1/iprscan-20080502-11440864.nocrc
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Query sequence: KIAA0741
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
TIGR00231 small_GTP: small GTP-binding protein domain    51.7    7.9e-13   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
TIGR00231   1/1     631   806 ..     1   186 []    51.7  7.9e-13

Alignments of top-scoring domains:
TIGR00231: domain 1 of 1, from 631 to 806: score 51.7, E = 7.9e-13
                   *->lkdikigivGdpnvGkstllnrllgnkgsitesgptdgttrdyvtes
                      l+ + i ++G+++ Gk+ +l++l+ +++  +e+ +  g+t+ ++++ 
    KIAA0741   631    LRAPIICVLGHVDTGKTKILDKLRHTHVQDGEA-G--GITQQIGATN 674  

                   ieedgktit..gat.fqW.gykf...nllDtpGlhrqedydalrrlyype
                   + ++ +  +++ + +f  +++++++  ++DtpG   +e +        + 
    KIAA0741   675 VPLEAINEQtkMIKnFDReNVRIpgmLIIDTPG---HESF-------SNL 714  

                   vlsslevldlvilvldvedglekdtkeiihhadkygvpillvgnkidlkd
                   ++++   +d++ilv+d+  gle++t e i+++++++ p+++++nkid   
    KIAA0741   715 RNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRLY 764  

                   ekpgyfvdlkphlaslfaklngephfiplsaetgkgidslfglvea<-*
                      ++  + ++++a  + k ++++ + + + +  + i +  +  ++   
    KIAA0741   765 ---DWKKSPDSDVAATLKKQKKNT-KDEFEERAKAIIVEFAQQGLN    806  

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