hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11291010/chunk_1/iprscan-20080502-11291010.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0732 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00670 100.4 2e-25 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00670 1/1 1276 1427 .. 1 146 [] 100.4 2e-25 Alignments of top-scoring domains: SM00670: domain 1 of 1, from 1276 to 1427: score 100.4, E = 2e-25 *->mkvvlDTnvlidgllardaleklle..kgevyipptVleEleylakg +v+DTn +id+l l +lle++k+++++p +V++El++la KIAA0732 1276 LFLVPDTNGFIDHL---ASLARLLEsrKYILVVPLIVINELDGLA-- 1317 ifgke.gekaleslkkleelalegkikleilleerksilyvLdy.lvlll ++ e+ ++ + ++ ++++++++e+l+ + +s+++ +++ l+++ KIAA0732 1318 ----KgQETDHRAGGYARVVQEKARKSIEFLEQRFESRDS-CLRaLTSRG 1362 atleeeelerlslkketeiyynllpnDalilatAkelge........... ++le +++++ ++ ++ nD+lil++++++++++ ++ + ++ KIAA0732 1363 NELESIAFRSEDITGQLGN------NDDLILSCCLHYCKdkakdfmpask 1406 .......rnvvLvTnDrdlrr<-* +++ + r+vvL+T+Dr+lr+ KIAA0732 1407 eepirllREVVLLTDDRNLRV 1427 //