hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11253967/chunk_1/iprscan-20080502-11253967.nocrc
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Query sequence: KIAA0730
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05168.4.fs HEPN domain                                     26.7    5.6e-07   1
PF05168.4.ls HEPN domain                                     20.2    5.6e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05168.4.fs   1/1     872   912 ..     1    41 [.    26.7  5.6e-07
PF05168.4.ls   1/1     872   999 ..     1   134 []    20.2  5.6e-05

Alignments of top-scoring domains:
PF05168.4.fs: domain 1 of 1, from 872 to 912: score 26.7, E = 5.6e-07
                   *->aedwlrrAerdLeaAellleegdYdwacFhaqQAaEkalKA<-*
                      a++wlr+A+ ++ aA+++l+ +  +w+cF ++ +  +al A   
    KIAA0730   872    ARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIA    912  

PF05168.4.ls: domain 1 of 1, from 872 to 999: score 20.2, E = 5.6e-05
                   *->aedwlrrAerdLeaAellleegdYdwacFhaqQAaEkalKAlLlklg
                      a++wlr+A+ ++ aA+++l+ +  +w+cF ++ +  +al A  ++  
    KIAA0730   872    ARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVR 918  

                   geppktHslreLlgeellkellgedlikelpeelreelreLdkayi...p
                   g   k    ++L+   +++e+ ++       e l  +   L+ + +++ +
    KIAA0730   919 GKSDKDVKPTALAQ--KIEEYSQQ------LEGLTNDVHTLEAYGVdslK 960  

                   sRYpdaeeegyppyeyYteedAeealkiAeevlefivekl<-*
                   +RYpd  +++  p + +t e A +  +++  ++   +e+    
    KIAA0730   961 TRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIK-LENF    999  

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