# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/hk03615.fasta.huge -Q ../query/KIAA0729.ptfa ./tmplib.23663 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0729, 1196 aa vs ./tmplib.23663 library 1986309 residues in 2037 sequences Expectation_n fit: rho(ln(x))= 5.8876+/-0.00554; mu= 12.2605+/- 0.377 mean_var=111.6558+/-26.116, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.121376 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2037) KIAA0570 ( 3412 res) hk03615s2 (3412) 7988 1411.0 0 >>KIAA0570 ( 3412 res) hk03615s2 (3412 aa) initn: 7988 init1: 7988 opt: 7988 Z-score: 7552.6 bits: 1411.0 E(): 0 Smith-Waterman score: 7988; 100.000% identity (100.000% similar) in 1196 aa overlap (1-1196:2217-3412) 10 20 30 KIAA07 ADDDWWPMQILIKCPNQIVRQMFQRLCIHV :::::::::::::::::::::::::::::: KIAA05 EKPTMLQWIELLTKQFNNSQAACEWFLDRMADDDWWPMQILIKCPNQIVRQMFQRLCIHV 2190 2200 2210 2220 2230 2240 40 50 60 70 80 90 KIAA07 IQRLRPVHAHLYLQPGMEDGSDDMDTSVEDIGGRSCVTRFVRTLLLIMEHGVKPHSKHLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 IQRLRPVHAHLYLQPGMEDGSDDMDTSVEDIGGRSCVTRFVRTLLLIMEHGVKPHSKHLT 2250 2260 2270 2280 2290 2300 100 110 120 130 140 150 KIAA07 EYFAFLYEFAKMGEEESQFLLSLQAISTMVHFYMGTKGPENPQVEVLSEEEGEEEEEEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 EYFAFLYEFAKMGEEESQFLLSLQAISTMVHFYMGTKGPENPQVEVLSEEEGEEEEEEED 2310 2320 2330 2340 2350 2360 160 170 180 190 200 210 KIAA07 ILSLAEEKYRPAALEKMIALVALLVEQSRSERHLTLSQTDMAALTGGKGFPFLFQHIRDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 ILSLAEEKYRPAALEKMIALVALLVEQSRSERHLTLSQTDMAALTGGKGFPFLFQHIRDG 2370 2380 2390 2400 2410 2420 220 230 240 250 260 270 KIAA07 INIRQTCNLIFSLCRYNNRLAEHIVSMLFTSIAKLTPEAANPFFKLLTMLMEFAGGPPGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 INIRQTCNLIFSLCRYNNRLAEHIVSMLFTSIAKLTPEAANPFFKLLTMLMEFAGGPPGM 2430 2440 2450 2460 2470 2480 280 290 300 310 320 330 KIAA07 PPFASYILQRIWEVIEYNPSQCLDWLAVQTPRNKLAHSWVLQNMENWVERFLLAHNYPRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 PPFASYILQRIWEVIEYNPSQCLDWLAVQTPRNKLAHSWVLQNMENWVERFLLAHNYPRV 2490 2500 2510 2520 2530 2540 340 350 360 370 380 390 KIAA07 RTSAAYLLVSLIPSNSFRQMFRSTRSLHIPTRDLPLSPDTTVVLHQVYNVLLGLLSRAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 RTSAAYLLVSLIPSNSFRQMFRSTRSLHIPTRDLPLSPDTTVVLHQVYNVLLGLLSRAKL 2550 2560 2570 2580 2590 2600 400 410 420 430 440 450 KIAA07 YVDAAVHGTTKLVPYFSFMTYCLISKTEKLMFSTYFMDLWNLFQPKLSEPAIATNHNKQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 YVDAAVHGTTKLVPYFSFMTYCLISKTEKLMFSTYFMDLWNLFQPKLSEPAIATNHNKQA 2610 2620 2630 2640 2650 2660 460 470 480 490 500 510 KIAA07 LLSFWYNVCADCPENIRLIVQNPVVTKNIAFNYILADHDDQDVVLFNRGMLPAYYGILRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 LLSFWYNVCADCPENIRLIVQNPVVTKNIAFNYILADHDDQDVVLFNRGMLPAYYGILRL 2670 2680 2690 2700 2710 2720 520 530 540 550 560 570 KIAA07 CCEQSPAFTRQLASHQNIQWAFKNLTPHASQYPGAVEELFNLMQLFIAQRPDMREEELED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 CCEQSPAFTRQLASHQNIQWAFKNLTPHASQYPGAVEELFNLMQLFIAQRPDMREEELED 2730 2740 2750 2760 2770 2780 580 590 600 610 620 630 KIAA07 IKQFKKTTISCYLRCLDGRSCWTTLISAFRILLESDEDRLLVVFNRGLILMTESFNTLHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 IKQFKKTTISCYLRCLDGRSCWTTLISAFRILLESDEDRLLVVFNRGLILMTESFNTLHM 2790 2800 2810 2820 2830 2840 640 650 660 670 680 690 KIAA07 MYHEATACHVTGDLVELLSIFLSVLKSTRPYLQRKDVKQALIQWQERIEFAHKLLTLLNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 MYHEATACHVTGDLVELLSIFLSVLKSTRPYLQRKDVKQALIQWQERIEFAHKLLTLLNS 2850 2860 2870 2880 2890 2900 700 710 720 730 740 750 KIAA07 YSPPELRNACIDVLKELVLLSPHDFLHTLVPFLQHNHCTYHHSNIPMSLGPYFPCRENIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 YSPPELRNACIDVLKELVLLSPHDFLHTLVPFLQHNHCTYHHSNIPMSLGPYFPCRENIK 2910 2920 2930 2940 2950 2960 760 770 780 790 800 810 KIAA07 LIGGKSNIRPPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFFSYHQFIHLLCRVAINCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 LIGGKSNIRPPRPELNMCLLPTMVETSKGKDDVYDRMLLDYFFSYHQFIHLLCRVAINCE 2970 2980 2990 3000 3010 3020 820 830 840 850 860 870 KIAA07 KFTETLVKLSVLVAYEGLPLHLALFPKLWTELCQTQSAMSKNCIKLLCEDPVFAEYIKCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 KFTETLVKLSVLVAYEGLPLHLALFPKLWTELCQTQSAMSKNCIKLLCEDPVFAEYIKCI 3030 3040 3050 3060 3070 3080 880 890 900 910 920 930 KIAA07 LMDERTFLNNNIVYTFMTHFLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 LMDERTFLNNNIVYTFMTHFLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRV 3090 3100 3110 3120 3130 3140 940 950 960 970 980 990 KIAA07 EISKASASLNGDLRALALLLSVHTPKQLNPALIPTLQELLSKCRTCLQQRNSLQEQEAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 EISKASASLNGDLRALALLLSVHTPKQLNPALIPTLQELLSKCRTCLQQRNSLQEQEAKE 3150 3160 3170 3180 3190 3200 1000 1010 1020 1030 1040 1050 KIAA07 RKTKDDEGATPIKRRRVSSDEEHTVDSCISDMKTETREVLTPTSTSDNETRDSSIIDPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 RKTKDDEGATPIKRRRVSSDEEHTVDSCISDMKTETREVLTPTSTSDNETRDSSIIDPGT 3210 3220 3230 3240 3250 3260 1060 1070 1080 1090 1100 1110 KIAA07 EQDLPSPENSSVKEYRMEVPSSFSEDMSNIRSQHAEEQSNNGRYDDCKEFKDLHCSKDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 EQDLPSPENSSVKEYRMEVPSSFSEDMSNIRSQHAEEQSNNGRYDDCKEFKDLHCSKDST 3270 3280 3290 3300 3310 3320 1120 1130 1140 1150 1160 1170 KIAA07 LAEEESEFPSTSISAVLSDLADLRSCDGQALPSQDPEVALSLSCGHSRGLFSHMQQHDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA05 LAEEESEFPSTSISAVLSDLADLRSCDGQALPSQDPEVALSLSCGHSRGLFSHMQQHDIL 3330 3340 3350 3360 3370 3380 1180 1190 KIAA07 DTLCRTIESTIHVVTRISGKGNQAAS :::::::::::::::::::::::::: KIAA05 DTLCRTIESTIHVVTRISGKGNQAAS 3390 3400 3410 1196 residues in 1 query sequences 1986309 residues in 2037 library sequences Scomplib [34.26] start: Thu Dec 18 15:13:47 2008 done: Thu Dec 18 15:13:48 2008 Total Scan time: 0.720 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]