hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11120068/chunk_1/iprscan-20080502-11120068.nocrc
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Query sequence: KIAA0722
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 334.6    6.5e-96   1
SM00219                                                 102.7    4.2e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      32   294 ..     1   280 []   102.7  4.2e-26
SM00220    1/1      32   294 ..     1   231 []   334.6  6.5e-96

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 32 to 294: score 102.7, E = 4.2e-26
                   *->ltlgkkLGeGaFGeVykGtlk....ieVAVKtLkeda....keeFlr
                       + ++ +G+GaF +V+kG+ ++++++eVAVK++++    +++  + +
    KIAA0722    32    FSRKDLIGHGAFAVVFKGRHRekhdLEVAVKCINKKNlaksQTLLGK 78   

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   E+ki+k+l  kH+NiV+L+               +++vmEy+ gGdL dy
    KIAA0722    79 EIKILKEL--KHENIVALYDFQEMA-------NSVYLVMEYCNGGDLADY 119  

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk..
                   L++ r  ls ++   f  QIA  M+ L+sk+++HRDL   N+L++++ ++
    KIAA0722   120 LHAMRT-LSEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNPAgr 168  

                   .......vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWm
                   + ++++ +vKI+DFG +R+l +         +  ++  ++         m
    KIAA0722   169 ranpnsiRVKIADFGFARYLQSN--------MMAATLCGSPM------YM 204  

                   APEslkdgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevley
                   APE+++   +  k D WS G   +  +t G+ P         s+++++ +
    KIAA0722   205 APEVIMSQHYDGKADLWSIGTIVYQCLT-GKAPFQA-----SSPQDLRLF 248  

                   lkkGyRl..pkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..
                    +k + l + +P +         ++ l +l l   +++ +dR  F e  +
    KIAA0722   249 YEKNKTLvpTIPRE--------TSAPLRQLLLALLQRNHKDRMDFDEFfh 290  

                   verl<-*
                   + +l   
    KIAA0722   291 HPFL    294  

SM00220: domain 1 of 1, from 32 to 294: score 334.6, E = 6.5e-96
                   *->YellkklGkGaFGkVylardkk.tgrlvAiKvik........erilr
                      +   +++G+GaF++V+++r++++ + +vA+K+i++++  +++  + +
    KIAA0722    32    FSRKDLIGHGAFAVVFKGRHREkHDLEVAVKCINkknlaksqTLLGK 78   

                   EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr
                   EikiLk+ +H+NIV Lyd+ e  +++ylVmEyc+G  GdL d+l+ +++ 
    KIAA0722    79 EIKILKElKHENIVALYDFQEMaNSVYLVMEYCNG--GDLADYLHAMRT- 125  

                   glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds......
                        lsE+++r +++Qi+ a+  LHs+gIiHRDLKP+NiLL+++ +++ 
    KIAA0722   126 -----LSEdTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNpagrra 170  

                   .....hvKlaDFGlArql......ttfvGTpeYmAPEvl...gYgkpavD
                   ++++ +vK+aDFG+Ar l+++    t++G+p YmAPEv+ +++Y++ ++D
    KIAA0722   171 npnsiRVKIADFGFARYLqsnmmaATLCGSPMYMAPEVImsqHYDG-KAD 219  

                   iWSlGcilyElltGkpPFp.....qldlifkkig..........Speakd
                    WS+G i+y +ltGk PF+ +++++l l ++k ++  ++ ++++S ++++
    KIAA0722   220 LWSIGTIVYQCLTGKAPFQasspqDLRLFYEKNKtlvptipretSAPLRQ 269  

                   LikklLvkdPekRlta.eaLedeldikaHPff<-*
                   L+  lL+++ ++R+  +e ++       HPf+   
    KIAA0722   270 LLLALLQRNHKDRMDFdEFFH-------HPFL    294  

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