hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11120068/chunk_1/iprscan-20080502-11120068.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0722 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 281.7 1.3e-81 1 PF00069.15.fs Protein kinase domain 279.8 4.8e-81 1 PF07714.7.fs Protein tyrosine kinase 136.1 2.1e-39 1 PF07714.7.ls Protein tyrosine kinase 132.7 9.6e-37 1 PF01163.12.ls RIO1 family -80.4 0.0042 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 32 294 .. 1 287 [] 279.8 4.8e-81 PF07714.7.fs 1/1 32 222 .. 1 201 [. 136.1 2.1e-39 PF00069.15.ls 1/1 32 294 .. 1 287 [] 281.7 1.3e-81 PF07714.7.ls 1/1 32 294 .. 1 272 [] 132.7 9.6e-37 PF01163.12.ls 1/1 45 197 .. 1 203 [] -80.4 0.0042 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 32 to 294: score 279.8, E = 4.8e-81 *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar + ++ +G G+f++V+k++h+ + +VAvK+i+k++ +++ + KIAA0722 32 FSRKDLIGHGAFAVVFKGRHREKHDlEVAVKCINKKNLAKSQ----T 74 rl.sEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyl +l+ Ei+ilk+L+H+NIv l+d+ e +++ylV+Eyc+gG dL dyl KIAA0722 75 LLgKEIKILKELKHENIVALYDFQEMANSVYLVMEYCNGG----DLADYL 120 setrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnn + + ++l sed+++ ++ Qi+ ++ LHs+giiHRDLKP+NILl+n KIAA0722 121 H---AMRTL--SEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNP 165 gvvda.....flKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn a++++ ++KiaDFG+A+ ++s+ + t++G+p YmAPEv++ ++ KIAA0722 166 AGRRAnpnsiRVKIADFGFARY--LqSNMmAATLCGSPMYMAPEVIM-SQ 212 gygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgpplef +y+ k+D WS+G i+y+ ltGk PF+ + s+ d + ++k++ + + KIAA0722 213 HYDGKADLWSIGTIVYQCLTGKAPFQAS---SpQDLRLFYEKNKTLVPTI 259 dspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf +++++ ++++L+ +L+++ ++R ++e ++HP++ KIAA0722 260 PRETS---------------APLRQLLLALLQRNHKDRMDFDEFFHHPFL 294 <-* KIAA0722 - - PF07714.7.fs: domain 1 of 1, from 32 to 222: score 136.1, E = 2.1e-39 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei ++ +G+GaF +V+kG+ + ++++++VAVK+++k+ + + KIAA0722 32 FSRKDLIGHGAFAVVFKGRHR---EKHDLEVAVKCInKK-NLAKS-- 72 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd + + +E++i+k+l +H+NiV L+ + + +y+V+Ey+ gGd KIAA0722 73 -QTLLGKEIKILKEL-KHENIVALYDFQEM-ANS----VYLVMEYCNGGD 115 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d+L++ r L+ ++ f +QiA +M L+sk+++HRDL N+L+ KIAA0722 116 LADYLHAM---RTLSEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILL 162 se........nl.vVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPE s++ +++ ++n VKI+DFG aR++ ++ + + + P mAPE KIAA0722 163 SNpagrranpNSiRVKIADFGFARYL----QSnMMAATLCGSPM-YMAPE 207 slkygkFtskSDVWS<-* +++ + k D WS KIAA0722 208 VIMSQHYDGKADLWS 222 PF00069.15.ls: domain 1 of 1, from 32 to 294: score 281.7, E = 1.3e-81 *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar + ++ +G G+f++V+k++h+ + +VAvK+i+k++ +++ + KIAA0722 32 FSRKDLIGHGAFAVVFKGRHREKHDlEVAVKCINKKNLAKSQ----T 74 rl.sEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyl +l+ Ei+ilk+L+H+NIv l+d+ e +++ylV+Eyc+gG dL dyl KIAA0722 75 LLgKEIKILKELKHENIVALYDFQEMANSVYLVMEYCNGG----DLADYL 120 setrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnn + + ++l sed+++ ++ Qi+ ++ LHs+giiHRDLKP+NILl+n KIAA0722 121 H---AMRTL--SEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILLSNP 165 gvvda.....flKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn a++++ ++KiaDFG+A+ ++s+ + t++G+p YmAPEv++ ++ KIAA0722 166 AGRRAnpnsiRVKIADFGFARY--LqSNMmAATLCGSPMYMAPEVIM-SQ 212 gygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgpplef +y+ k+D WS+G i+y+ ltGk PF+ + s+ d + ++k++ + + KIAA0722 213 HYDGKADLWSIGTIVYQCLTGKAPFQAS---SpQDLRLFYEKNKTLVPTI 259 dspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf +++++ ++++L+ +L+++ ++R ++e ++HP++ KIAA0722 260 PRETS---------------APLRQLLLALLQRNHKDRMDFDEFFHHPFL 294 <-* KIAA0722 - - PF07714.7.ls: domain 1 of 1, from 32 to 294: score 132.7, E = 9.6e-37 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei ++ +G+GaF +V+kG+ + ++++++VAVK+++k+ + + KIAA0722 32 FSRKDLIGHGAFAVVFKGRHR---EKHDLEVAVKCInKK-NLAKS-- 72 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd + + +E++i+k+l +H+NiV L+ + + +y+V+Ey+ gGd KIAA0722 73 -QTLLGKEIKILKEL-KHENIVALYDFQEM-ANS----VYLVMEYCNGGD 115 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d+L++ r L+ ++ f +QiA +M L+sk+++HRDL N+L+ KIAA0722 116 LADYLHAM---RTLSEDTIRLFLQQIAGAMRLLHSKGIIHRDLKPQNILL 162 se........nl.vVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPE s++ +++ ++n VKI+DFG aR++ ++ + + + P mAPE KIAA0722 163 SNpagrranpNSiRVKIADFGFARYL----QSnMMAATLCGSPM-YMAPE 207 slkygkFtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyR +++ + k D WS G + +t G+ P ++ s+++ l l+ye++ KIAA0722 208 VIMSQHYDGKADLWSIGTIVYQCLT-GKAP-FQASSPQD-LRLFYEKNKT 254 Lpr..PenCPdelYdlMlqCWaedPedRPtFsel..veeL<-* L ++ P+ +++ l +l+l +++ +dR F e ++ +L KIAA0722 255 LVPtiPRETSAPLRQLLLALLQRNHKDRMDFDEFfhHPFL 294 PF01163.12.ls: domain 1 of 1, from 45 to 197: score -80.4, E = 0.0042 *->nVYhAvsyaedgedptevAvK.iyrtgtteFkk.rkkYrdgdfRFrd +V++++ e+ + evAvK i + ++ ++ k ++ + + KIAA0722 45 VVFKGRH-REKHD--LEVAVKcINKKNLAKSQTlLGKEIKILKELK- 87 rksktnwrklvrlWAeKEfrNLkRLyeaGvpVPkPiavnrhvLVMEFigd ++N ++Ly + + n LVME++ KIAA0722 88 ------------------HENIVALYDFQ------EMANSVYLVMEYCN- 112 kdGvpAPrLkdveleldlseeeaeelydeiirEymrrlYkeagLVHGDLS G+ A L+ + + lse+ ++ l+ + i rl++ g++H DL KIAA0722 113 -GGDLADYLHAMRT---LSEDTIR-LFLQQIA-GAMRLLHSKGIIHRDLK 156 EYNvLvhddgkpviIDvsQaVeldHPnAlefLeRDieNiinF.Frrkgvd N+L+ a ++Pn++ i++F+F+r+ + KIAA0722 157 PQNILLSNP----------AGRRANPNSIR------VKIADFgFARYLQS 190 krvvdfrel<-* + + l KIAA0722 191 N--MMAATL 197 //