hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11000583/chunk_1/iprscan-20080502-11000583.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0715 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00702.16.fs haloacid dehalogenase-like hydrolase 23.4 2.3e-06 3 PF08282.2.fs haloacid dehalogenase-like hydrolase 15.3 0.00011 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF08282.2.fs 1/1 1086 1107 .. 219 240 .. 15.3 0.00011 Alignments of top-scoring domains: PF08282.2.fs: domain 1 of 1, from 1086 to 1107: score 15.3, E = 0.00011 *->eviAFGDgeNDieMLelaGlgV<-* +++++GDg ND++M+++a++g+ KIAA0715 1086 MTLSIGDGANDVSMIQAADIGI 1107 //