hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10373749/chunk_1/iprscan-20080502-10373749.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0702 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR00927 2A1904: K+-dependent Na+/Ca+ exchanger 1977.4 0 1 TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger h 140.0 2.2e-39 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR00927 1/1 4 984 .. 1 1226 [] 1977.4 0 TIGR00367 1/1 460 984 .. 1 523 [] 140.0 2.2e-39 Alignments of top-scoring domains: TIGR00927: domain 1 of 1, from 4 to 984: score 1977.4, E = 0 *->mGKLiRmGaqERrlLrpKRLHWsRlLFlLGmLiiGstYqyLrrPrgl mGKLiRmG+qER+lLr+KRLHWsRlLFlLGmLiiGstYq+LrrPrgl KIAA0702 4 MGKLIRMGPQERWLLRTKRLHWSRLLFLLGMLIIGSTYQHLRRPRGL 50 pslwaavssqqPiKlAsRDLsneEmmmvssdpsksssEmegemlaPqatv +slwaavss+qPiKlAsRDLs+eEmmm+ss+psk+ssEm+g+ml+Pqa+v KIAA0702 51 SSLWAAVSSHQPIKLASRDLSSEEMMMMSSSPSKPSSEMGGKMLVPQASV 100 grdeatpsiaventPsiPrrtakiiPttlknnysPtaagtervKEdtpat g+deat+s++ven+Ps+P+rtak+iPtt+knnysPtaagter+KEdtp++ KIAA0702 101 GSDEATLSMTVENIPSMPKRTAKMIPTTTKNNYSPTAAGTERRKEDTPTS 150 PsralnhyistssRqvvksYtpkpaRGevKsssPtqaRekvrkytPsPlG sr+l++y+stssRq+vk+Ytp+p RGe+Ks+sPtq+Rekv kytPsP+G KIAA0702 151 -SRTLTYYTSTSSRQIVKKYTPTP-RGEMKSYSPTQVREKV-KYTPSPRG 197 rmvnsyaPstlmtmershgitPrttvKDseitatykiLetnpskRvlekt r+v++y+Pst+mtme+sh+itPrttvKDs+itatykiLetn++kR++e+t KIAA0702 198 RRVGTYVPSTFMTMETSHAITPRTTVKDSDITATYKILETNSLKRIMEET 247 tPtpLKgvvdntrtFLtrevEtdvltsPrsvvekktLttpRRvesnsstn tPt+LKg++d+t+tFLt+evE++vltsPrsv+ek++L++pRRvesnss++ KIAA0702 248 TPTTLKGMFDSTPTFLTHEVEANVLTSPRSVMEKNNLFPPRRVESNSSAH 297 hrGlvGknnlttPqgtvLehtaAtsEgqvtisimtgssPaetkastaAwk ++GlvGk+n++tPqgtvL ht+AtsEgqvtis+mtgssPaetka+taAw+ KIAA0702 298 PWGLVGKSNPKTPQGTVLLHTPATSEGQVTISTMTGSSPAETKAFTAAWS 347 vrnPlsrtsapavriasatvrglaKkPstApstsatPrvrAklttqvhhC +rnP++rts++a+++a+a+v++laKkPstApsts+tP+vrAklt+qvhhC KIAA0702 348 LRNPSPRTSVSAIKTAPAIVWRLAKKPSTAPSTSTTPTVRAKLTMQVHHC 397 vvvkPaPavpttPsPslttallPeapspspsvLPsglPdLhPKaEYPrDL vvvkP+Pa++ttPsPslttallPe++spspsvLP++lPdLhPK+EYP+DL KIAA0702 398 VVVKPTPAMLTTPSPSLTTALLPEELSPSPSVLPPSLPDLHPKGEYPPDL 447 FsveeRRqGWvvLHiFGmlYvFvALAivCDEYFvPALGvitDKLqisEDv FsveeRRqGWvvLH+FGm+YvFvALAivCDEYFvPALGvitDKLqisEDv KIAA0702 448 FSVEERRQGWVVLHVFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDV 497 AGAtFmAAGGsAPELFtsLiGvFisHsnvGiGtivGsAvFniLFviGtCa AGAtFmAAGGsAPELFtsLiGvFisHsnvGiGtivGsAvFniLFviGtC+ KIAA0702 498 AGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCS 547 LFsREiLnLtWWPLFRDvsFYilDLimLilFFLDsLiaWWEslLLLLAYA LFsREiLnLtWWPLFRDvsFYilDLimLilFFLDsLiaWWEslLLLLAYA KIAA0702 548 LFSREILNLTWWPLFRDVSFYILDLIMLILFFLDSLIAWWESLLLLLAYA 597 lYvFtmKWnkqlElWvKeqLsrRPvaKvmALgDLsKPgDGaievdeqqDn +YvFtmKWnk++E+WvKeqLsrRPvaKvmAL+DLsK KIAA0702 598 FYVFTMKWNKHIEVWVKEQLSRRPVAKVMALEDLSK-------------- 633 kkLkLpslLtrGsssasLhnsiirstiyqLmLhsLDPLgearpskdkeee LpslLtrGsss+sLhns+irstiyqLmLhsLDPL+e+r++k+keee KIAA0702 634 ----LPSLLTRGSSSTSLHNSTIRSTIYQLMLHSLDPLREVRLAKEKEEE 679 llqearvltqtkaeeskdeeepaelpavtvtpapapedkgdqeedpgsqg +l+ qg KIAA0702 680 SLN---------------------------------------------QG 684 dvaeaeakgertgeEeeaeklpavteaegekdeesggeaerkedgqeges ++a+++ak+e+++eEee++klpavt++++++++++g+++e ++g++ KIAA0702 685 ARAQPQAKAESKPEEEEPAKLPAVTVTPAPVPDIKGDQKE-----NPGGQ 729 EekaeeeseGeieaErkgeqegEgeieakeadvkGeeeaegkeveaeeet E++ae+es+Ge+++E +ge++gEge+e+k+ +Ge t KIAA0702 730 EDVAEAESTGEMPGE-EGETAGEGETEEKS---GGE-------------T 762 eaEGdedEgEieteeeGeevedEdegeaeakeveeevetkgdeketeiea ++EG EgE+et+++Gee+edE +eae+ kgd+ KIAA0702 763 QPEG---EGETETQGKGEECEDE--NEAEG---------KGDN------- 791 eeeaegkededEGEieAeedgEmkGdegaegkveaeeeeeadekdeheed e+edEGEi+A edgEmkG+eg KIAA0702 792 -------EGEDEGEIHA-EDGEMKGNEG---------------------- 811 eeeqaddeevkdetgeqelnAenqgeakedEkGvdgeggsDGGdsEeEEe et++qel+Aen+geak+dEkGv+++ggsDGGdsEeEEe KIAA0702 812 ------------ETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEE 849 EeeEqeEeEEeEEeEEEeEEeE......neePLsLeWPEtRqKqAiYLFL EeeEqeEeEEeEE+EEEeEEeE++++++neePLsL+WPEtRqKqAiYLFL KIAA0702 850 EEEEQEEEEEEEEQEEEEEEEEeeeekgNEEPLSLDWPETRQKQAIYLFL 899 LPivFPLWLtvPDvRRlEarKFFvitFLGsilWiAmFsYLmvWWAHqvGE LPivFPLWLtvPDvRR+E+rKFFv+tFLGsi+WiAmFsYLmvWWAHqv E KIAA0702 900 LPIVFPLWLTVPDVRRQESRKFFVFTFLGSIMWIAMFSYLMVWWAHQVSE 949 tiGisEEimGLtiLAAGtsiPDLitsvivARKGLGDmAvsssvGsniFDi KIAA0702 950 Q------------------------------------------------- 950 tvGLPvPWlLFslingLqPvpvssnGLFCAivLLFLmLLFvissiAsCKW P+p n F L s KIAA0702 951 --------------QERNPLPAGPNDTF----------LQDQS------- 969 RmnKiLGFtmFLLYFvFLiisvmLEDRiisCPvsv<-* v+ E R s v KIAA0702 970 --------------------PVLRESRGSSEFVQF 984 TIGR00367: domain 1 of 1, from 460 to 984: score 140.0, E = 2.2e-39 *->LillligllilGLiLliygadlfVkslvrIarkLGiSpliiGvTvvA L +++g+ +++ +L+i++++ fV++l +I+ kL iS++++G+T++A KIAA0702 460 L--HVFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMA 504 iGTSlPElftSLiAslagqpdigvGnviGSNIfNIlLiLGlsAiisrpii +G+S+PElftSLi++++ ++++g+G+++GS++fNIl+++G ++++sr+i+ KIAA0702 505 AGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCSLFSREIL 554 vdkdlPLrrdilflLlvsilLlffglDGqSYSFFvmwisrldgvvllily +++++PL+rd++f++l++i+L++f+lD + w+++l+++ +++ y KIAA0702 555 NLTWWPLFRDVSFYILDLIMLILFFLDSL-----IAWWESLLLLLAYAFY 599 vvYLlflvKeerwvekesnRNKVVKVTVSEAQAKASTAGDKEEPTLPNKP v ++++ e wv+ + R V KV E K KIAA0702 600 VFTMKWNKHIEVWVKEQLSRRPVAKVMALEDLSKLPSL------------ 637 RLQRGGSSASLHNSLmRNSiFQLmiHTLDPLAEELGSYGKLKYYdtyteE L RG SS SLHNS +R i+QLm+H LDPL E K K +++ + KIAA0702 638 -LTRGSSSTSLHNSTIRSTIYQLMLHSLDPLREV--RLAKEKEEESLNQG 684 GRFREKASiLHK..................iAKKKCqldenerqvGAANH R A K++++++ + + + ++ ++ K +en+ G KIAA0702 685 ARAQPQAKAESKpeeeepaklpavtvtpapVPDIKGDQKENP---GGQED 731 VDYAAEKiELP.........................NSTST......... V A E+P++++++ ++++++++++++++++++ T T++++++ ++ KIAA0702 732 VAEAESTGEMPgeegetagegeteeksggetqpegeGETETqgkgeeced 781 ................EV.....Em......TPSSEAS...........E +++ ++++++++++++E++ +++Em++++++T S E S +++++ ++++ KIAA0702 782 eneaegkgdnegedegEIhaedgEMkgnegeTESQELSaenhgeakndeK 831 PVQNGNLS...HSiEAADAPQATETAEEDDDQ.................P V G S+++ S E + E EE+++Q+++++++++++++++++P KIAA0702 832 GVEDGGGSdggDSEEEEEEEEEQEEEEEEEEQeeeeeeeeeeeekgneeP 881 LSLSWPskTekqiffklvlliigPLWiTLPDVRKPASKKFFPiTFFGSli LSL WP kq +++l+i++PLW+T+PDVR+ S+KFF TF GS+ KIAA0702 882 LSLDWPETRQKQAIYLFLLPIVFPLWLTVPDVRRQESRKFFVFTFLGSIM 931 glvVgsrLLVdsAvkiAeNilgISEkiiGLtllAiGTSlPELvvSvaaar +++ +s+L+V++A+++ e KIAA0702 932 WIAMFSYLMVWWAHQVSE-------------------------------- 949 kglgDiAvGnviGSNIFNIlvgLgvpaLfvpiiipveplalslDapVmvi ++ ++pa p ++++ D + KIAA0702 950 QQERN------------------PLPA--GP------NDTFLQDQS---- 969 VtLvlmLlfktlsmklgRwRmNKieGvlllalYiaY<-* ++ + R+ + + KIAA0702 970 ------PVLRE-----SRG----------SSEFVQF 984 //