# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/hg01814mrp1.fasta.huge -Q ../query/KIAA0702.ptfa ./tmplib.23663 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA0702, 988 aa
 vs ./tmplib.23663 library

1986517 residues in  2037 sequences
  Expectation_n fit: rho(ln(x))= 11.3619+/-0.00977; mu= -15.5769+/- 0.659
 mean_var=416.0896+/-97.310, 0's: 0 Z-trim: 5  B-trim: 0 in 0/40
 Lambda= 0.062875

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 39, opt: 27, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2037)
KIAA0835  ( 1167 res)   hj05861                    (1167)  273 39.9  0.0023


>>KIAA0835  ( 1167 res)   hj05861                         (1167 aa)
 initn: 248 init1: 248 opt: 273  Z-score: 152.1  bits: 39.9 E(): 0.0023
Smith-Waterman score: 278;  35.321% identity (58.257% similar) in 218 aa overlap (669-880:144-343)

      640       650       660       670        680       690       
KIAA07 TRGSSSTSLHNSTIRSTIYQLMLHSLDPLREVRLAKEKEE-ESLNQGARAQPQAKAE-SK
                                     ::. :. ..: :.  .::.:. ... :  .
KIAA08 EHLVSKRKSHPLKLALDEGYGVDSDGSEDTEVKDASVSDESEGTLEGAEAETSGQDEIHR
           120       130       140       150       160       170   

        700       710       720       730       740       750      
KIAA07 PEEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAEAESTGEMPGEEGETAGE----G
       ::  : .. :           .:.    :: :.   : : : : . . .:  :      :
KIAA08 PETAE-GRSP-----------VKSHFGSNPIGS---ATASSKGSYSSYQGIIATSLLNLG
            180                  190          200       210        

            760       770       780       790       800       810  
KIAA07 ETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGE
       .  :..  :   :  :..   : :     .. ::: ...:::    :. ::.:   .   
KIAA08 QIAEETLVE---EDLGQAAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTT
      220          230       240       250       260       270     

            820       830       840       850       860       870  
KIAA07 TESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE
        .::.:  ..  .: ..:.. . :  :   ..:::::::::.::.:::::.:::::::::
KIAA08 ERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEE
         280       290       300       310       320       330     

            880       890       900       910       920       930  
KIAA07 EEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLTVPDVRRQESRKFFVFTFLGSIMW
       :::. .::                                                    
KIAA08 EEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSD
         340       350       360       370       380       390     




988 residues in 1 query   sequences
1986517 residues in 2037 library sequences
 Scomplib [34.26]
 start: Thu Dec 18 15:12:40 2008 done: Thu Dec 18 15:12:41 2008
 Total Scan time:  0.670 Total Display time:  0.030

Function used was FASTA [version 34.26.5 April 26, 2007]