hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10285190/chunk_1/iprscan-20080502-10285190.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0697 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00248 693.6 5.6e-204 25 SM00322 66.7 2.9e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00248 1/25 117 146 .. 1 30 [] 11.1 1.5e+02 SM00248 2/25 150 179 .. 1 30 [] 19.2 0.57 SM00248 3/25 184 213 .. 1 30 [] 28.1 0.0012 SM00248 4/25 217 246 .. 1 30 [] 33.8 2.3e-05 SM00248 5/25 250 279 .. 1 30 [] 29.1 0.00062 SM00248 6/25 284 313 .. 1 30 [] 29.2 0.00058 SM00248 7/25 317 346 .. 1 30 [] 30.2 0.00028 SM00248 8/25 350 379 .. 1 30 [] 23.7 0.026 SM00248 9/25 383 412 .. 1 30 [] 38.9 6.8e-07 SM00248 10/25 417 446 .. 1 30 [] 25.5 0.0072 SM00248 11/25 447 476 .. 1 30 [] 33.4 3e-05 SM00248 12/25 480 509 .. 1 30 [] 32.4 6.2e-05 SM00248 13/25 513 542 .. 1 30 [] 28.4 0.00096 SM00248 14/25 547 576 .. 1 30 [] 27.2 0.0022 SM00248 15/25 580 609 .. 1 30 [] 19.5 0.48 SM00248 16/25 965 994 .. 1 30 [] 29.8 0.00038 SM00248 17/25 998 1027 .. 1 30 [] 34.5 1.5e-05 SM00248 18/25 1032 1061 .. 1 30 [] 23.5 0.029 SM00248 19/25 1065 1094 .. 1 30 [] 30.2 0.00028 SM00248 20/25 1100 1129 .. 1 30 [] 33.7 2.5e-05 SM00248 21/25 1134 1163 .. 1 30 [] 26.7 0.0033 SM00248 22/25 1167 1196 .. 1 30 [] 25.6 0.0069 SM00248 23/25 1202 1231 .. 1 30 [] 23.3 0.035 SM00248 24/25 1235 1264 .. 1 30 [] 38.5 9.1e-07 SM00248 25/25 1268 1297 .. 1 30 [] 18.0 1.3 SM00322 1/1 1607 1677 .. 1 63 [] 66.7 2.9e-15 Alignments of top-scoring domains: SM00248: domain 1 of 25, from 117 to 146: score 11.1, E = 1.5e+02 *->dGrTpLHlAaengnlevvklLldkgadina<-* ++ L A+++g+++ v+ Ll +g ++n+ KIAA0697 117 SDNRSLAEACSEGDVNAVRKLLIEGRSVNE 146 SM00248: domain 2 of 25, from 150 to 179: score 19.2, E = 0.57 *->dGrTpLHlAaengnlevvklLldkgadina<-* +G + L lA++ g++e+++ Ll a++++ KIAA0697 150 EGESLLCLACSAGYYELAQVLLAMHANVED 179 SM00248: domain 3 of 25, from 184 to 213: score 28.1, E = 0.0012 *->dGrTpLHlAaengnlevvklLldkgadina<-* + T L+ Aa g++++vklLl ++ad+na KIAA0697 184 GDITSLMAAANGGHVKIVKLLLAHKADVNA 213 SM00248: domain 4 of 25, from 217 to 246: score 33.8, E = 2.3e-05 *->dGrTpLHlAaengnlevvklLldkgadina<-* G+T+L +A++ g+++vvk Ll++ga+i++ KIAA0697 217 TGNTALTYACAGGYVDVVKVLLESGASIED 246 SM00248: domain 5 of 25, from 250 to 279: score 29.1, E = 0.00062 *->dGrTpLHlAaengnlevvklLldkgadina<-* +G+TpL+ A + g++ev++lLl++ga in KIAA0697 250 NGHTPLMEAGSAGHVEVARLLLENGAGINT 279 SM00248: domain 6 of 25, from 284 to 313: score 29.2, E = 0.00058 *->dGrTpLHlAaengnlevvklLldkgadina<-* ++L lA+++g+le+v++Ll++gad + KIAA0697 284 FKESALTLACYKGHLEMVRFLLEAGADQEH 313 SM00248: domain 7 of 25, from 317 to 346: score 30.2, E = 0.00028 *->dGrTpLHlAaengnlevvklLldkgadina<-* + +T+L+ A++ g++ev++lLld+ga +n+ KIAA0697 317 EMHTALMEACMDGHVEVARLLLDSGAQVNM 346 SM00248: domain 8 of 25, from 350 to 379: score 23.7, E = 0.026 *->dGrTpLHlAaengnlevvklLldkgadina<-* +pL lAa+ g++e++ lL+++ga++++ KIAA0697 350 SFESPLTLAACGGHVELAALLIERGASLEE 379 SM00248: domain 9 of 25, from 383 to 412: score 38.9, E = 6.8e-07 *->dGrTpLHlAaengnlevvklLldkgadina<-* +G+TpL+ Aa++g++e+v lLl ga+ina KIAA0697 383 EGYTPLMEAAREGHEEMVALLLGQGANINA 412 SM00248: domain 10 of 25, from 417 to 446: score 25.5, E = 0.0072 *->dGrTpLHlAaengnlevvklLldkgadina<-* T+L lA++ g lev+ +L+++gadi++ KIAA0697 417 TQETALTLACCGGFLEVADFLIKAGADIEL 446 SM00248: domain 11 of 25, from 447 to 476: score 33.4, E = 3e-05 *->dGrTpLHlAaengnlevvklLldkgadina<-* TpL+ Aa++g+le+vk+Ll +ga+++a KIAA0697 447 GCSTPLMEAAQEGHLELVKYLLAAGANVHA 476 SM00248: domain 12 of 25, from 480 to 509: score 32.4, E = 6.2e-05 *->dGrTpLHlAaengnlevvklLldkgadina<-* G+T+L +A+eng+ +v+ Ll++gad++ KIAA0697 480 TGDTALTYACENGHTDVADVLLQAGADLEH 509 SM00248: domain 13 of 25, from 513 to 542: score 28.4, E = 0.00096 *->dGrTpLHlAaengnlevvklLldkgadina<-* GrTpL+ Aa+ g++ +v++L++kga++n KIAA0697 513 GGRTPLMKAARAGHVCTVQFLISKGANVNR 542 SM00248: domain 14 of 25, from 547 to 576: score 27.2, E = 0.0022 *->dGrTpLHlAaengnlevvklLldkgadina<-* +++T L lA++ g+l vv+lLl +gad++ KIAA0697 547 NDHTVLSLACAGGHLAVVELLLAHGADPTH 576 SM00248: domain 15 of 25, from 580 to 609: score 19.5, E = 0.48 *->dGrTpLHlAaengnlevvklLldkgadina<-* dG T L Aa+ g+ +vv +Lld+ ++ KIAA0697 580 DGSTMLIEAAKGGHTSVVCYLLDYPNNLLS 609 SM00248: domain 16 of 25, from 965 to 994: score 29.8, E = 0.00038 *->dGrTpLHlAaengnlevvklLldkgadina<-* + +T+L lA++ g++e+v+ Ll++ga+i+ KIAA0697 965 NHDTALTLACAGGHEELVQTLLERGASIEH 994 SM00248: domain 17 of 25, from 998 to 1027: score 34.5, E = 1.5e-05 *->dGrTpLHlAaengnlevvklLldkgadina<-* G+TpL lAa g++ vv++Lld+gadi+a KIAA0697 998 KGFTPLILAATAGHVGVVEILLDNGADIEA 1027 SM00248: domain 18 of 25, from 1032 to 1061: score 23.5, E = 0.029 *->dGrTpLHlAaengnlevvklLldkgadina<-* +TpL lA++ g+ evv+lLl +ga+ + KIAA0697 1032 TKDTPLSLACSGGRQEVVELLLARGANKEH 1061 SM00248: domain 19 of 25, from 1065 to 1094: score 30.2, E = 0.00028 *->dGrTpLHlAaengnlevvklLldkgadina<-* ++TpL lAa+ g+++++k+Ll++ga+in KIAA0697 1065 SDYTPLSLAASGGYVNIIKILLNAGAEINS 1094 SM00248: domain 20 of 25, from 1100 to 1129: score 33.7, E = 2.5e-05 *->dGrTpLHlAaengnlevvklLldkgadina<-* G +pL+lAa+ng+ vklLld g dina KIAA0697 1100 LGISPLMLAAMNGHTAAVKLLLDMGSDINA 1129 SM00248: domain 21 of 25, from 1134 to 1163: score 26.7, E = 0.0033 *->dGrTpLHlAaengnlevvklLldkgadina<-* + +T+L lA+ g+ evv lLld++a+++ KIAA0697 1134 NRNTALTLACFQGRTEVVSLLLDRKANVEH 1163 SM00248: domain 22 of 25, from 1167 to 1196: score 25.6, E = 0.0069 *->dGrTpLHlAaengnlevvklLldkgadina<-* G TpL+ Aa+ g+ ev + Lldkgad+na KIAA0697 1167 TGLTPLMEAASGGYAEVGRVLLDKGADVNA 1196 SM00248: domain 23 of 25, from 1202 to 1231: score 23.3, E = 0.035 *->dGrTpLHlAaengnlevvklLldkgadina<-* +T+L +Aa +g++++++lL+ +ga i++ KIAA0697 1202 SRDTALTIAADKGHYKFCELLIGRGAHIDV 1231 SM00248: domain 24 of 25, from 1235 to 1264: score 38.5, E = 9.1e-07 *->dGrTpLHlAaengnlevvklLldkgadina<-* G+TpL+lAa g+l+vv+lL+++gad++a KIAA0697 1235 KGNTPLWLAANGGHLDVVQLLVQAGADVDA 1264 SM00248: domain 25 of 25, from 1268 to 1297: score 18.0, E = 1.3 *->dGrTpLHlAaengnlevvklLldkgadina<-* TpL+ A ++g+++vv++L+++ + KIAA0697 1268 RKITPLMAAFRKGHVKVVRYLVKEVNQFPS 1297 SM00322: domain 1 of 1, from 1607 to 1677: score 66.7, E = 2.9e-15 *->a.vtiev.ipadkvGriIGkgGstIkkieeetgvkIdipg......e + + +v++p+ + r+IG+gG +I++i+e tg++Idi++ ++++++ KIAA0697 1607 VrRSKKVsVPSTVISRVIGRGGCNINAIREFTGAHIDIDKqkdktgD 1653 rtvtItGppenvekAkelileile<-* r++tI+G e ++A +li ++++ KIAA0697 1654 RIITIRGGTESTRQATQLINALIK 1677 //