hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10235946/chunk_1/iprscan-20080502-10235946.nocrc
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Query sequence: KIAA0694
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00169.19.fs PH domain                                       68.6      2e-20   1
PF00169.19.ls PH domain                                       70.6    4.6e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1     184   292 ..     1    92 []    68.6    2e-20
PF00169.19.ls   1/1     184   292 ..     1    92 []    70.6  4.6e-18

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 184 to 292: score 68.6, E = 2e-20
                   *->vikeGwLlkkg.........gkkswkkRyfvLfd.....dvLlyykd
                      v+k+GwL+k   +++ +++   +s+kkRyf L++ ++++  + +ykd
    KIAA0694   184    VFKSGWLYKGNfnstvnntvTVRSFKKRYFQLTQlpdnsYIMNFYKD 230  

                   kk..kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseee
                   +k +k+pkg+i L++++ v+   +  rk++Fe++++d + ++l+ae+e +
    KIAA0694   231 EKisKEPKGCIFLDSCtGVVQNNRL-RKYAFELKMnDLTYFVLAAETESD 279  

                   rkeWvkaiqsair<-*
                   + eW++ +++ +    
    KIAA0694   280 MDEWIHTLNRILQ    292  

PF00169.19.ls: domain 1 of 1, from 184 to 292: score 70.6, E = 4.6e-18
                   *->vikeGwLlkkg.........gkkswkkRyfvLfd.....dvLlyykd
                      v+k+GwL+k   +++ +++   +s+kkRyf L++ ++++  + +ykd
    KIAA0694   184    VFKSGWLYKGNfnstvnntvTVRSFKKRYFQLTQlpdnsYIMNFYKD 230  

                   kk..kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseee
                   +k +k+pkg+i L++++ v+   +  rk++Fe++++d + ++l+ae+e +
    KIAA0694   231 EKisKEPKGCIFLDSCtGVVQNNRL-RKYAFELKMnDLTYFVLAAETESD 279  

                   rkeWvkaiqsair<-*
                   + eW++ +++ +    
    KIAA0694   280 MDEWIHTLNRILQ    292  

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