hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09514468/chunk_1/iprscan-20080502-09514468.nocrc
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Query sequence: KIAA0675
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           38.1    5.7e-13   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           39.9      8e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1    1157  1196 ..     1    50 []    38.1  5.7e-13
PF00097.15.ls   1/1    1157  1196 ..     1    50 []    39.9    8e-09

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 1157 to 1196: score 38.1, E = 5.7e-13
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C IC+e+l++++   + +lpC H+     f+  C++ wl    + tC
    KIAA0675  1157    CVICHENLSPEN---LSVLPCAHK-----FHAQCIRPWLM--QQGTC 1193 

                   plC<-*
                   p C   
    KIAA0675  1194 PTC    1196 

PF00097.15.ls: domain 1 of 1, from 1157 to 1196: score 39.9, E = 8e-09
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C IC+e+l++++   + +lpC H+     f+  C++ wl    + tC
    KIAA0675  1157    CVICHENLSPEN---LSVLPCAHK-----FHAQCIRPWLM--QQGTC 1193 

                   plC<-*
                   p C   
    KIAA0675  1194 PTC    1196 

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