hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09495779/chunk_1/iprscan-20080502-09495779.nocrc
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Query sequence: KIAA0674
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00254.18.ls FKBP-type peptidyl-prolyl cis-trans isomeras   118.2    2.2e-32   1
PF00254.18.fs FKBP-type peptidyl-prolyl cis-trans isomeras   116.4    5.2e-32   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00254.18.fs   1/1     204   302 ..     1   111 []   116.4  5.2e-32
PF00254.18.ls   1/1     204   302 ..     1   111 []   118.2  2.2e-32

Alignments of top-scoring domains:
PF00254.18.fs: domain 1 of 1, from 204 to 302: score 116.4, E = 5.2e-32
                   *->gdgprkpkkGDtVtvhYtGkLe.d...GtvFDsslGydekkkkkgrg
                       dgp  ++ GD + v YtG+L +++  G+vFDs+   +       ++
    KIAA0674   204    ADGPA-VEVGDSLEVAYTGWLFqNhvlGQVFDST--AN-------KD 240  

                   kPfeFtlGsGqVIkGwdeGllgMkvGEkrkltIPpelaYGeqdeeGlagg
                   k + ++lGsG+VIkGw++G+lgMk+G+kr l++Pp  a G+   eG+ g+
    KIAA0674   241 KLLRLKLGSGKVIKGWEDGMLGMKKGGKRLLIVPPACAVGS---EGVIGW 287  

                   vlfaIPPnatLvFeVELl<-*
                   +      ++ LvFeVE+    
    KIAA0674   288 T---QATDSILVFEVEVR    302  

PF00254.18.ls: domain 1 of 1, from 204 to 302: score 118.2, E = 2.2e-32
                   *->gdgprkpkkGDtVtvhYtGkLe.d...GtvFDsslGydekkkkkgrg
                       dgp  ++ GD + v YtG+L +++  G+vFDs+   +       ++
    KIAA0674   204    ADGPA-VEVGDSLEVAYTGWLFqNhvlGQVFDST--AN-------KD 240  

                   kPfeFtlGsGqVIkGwdeGllgMkvGEkrkltIPpelaYGeqdeeGlagg
                   k + ++lGsG+VIkGw++G+lgMk+G+kr l++Pp  a G+   eG+ g+
    KIAA0674   241 KLLRLKLGSGKVIKGWEDGMLGMKKGGKRLLIVPPACAVGS---EGVIGW 287  

                   vlfaIPPnatLvFeVELl<-*
                   +      ++ LvFeVE+    
    KIAA0674   288 T---QATDSILVFEVEVR    302  

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