hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09363709/chunk_1/iprscan-20080502-09363709.nocrc
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Query sequence: KIAA0666
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00498                                                 374.6     6e-108   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00498      1/1     607  1078 ..     1   499 []   374.6   6e-108

Alignments of top-scoring domains:
SM00498: domain 1 of 1, from 607 to 1078: score 374.6, E = 6e-108
                   *->pkkepkpkkkLKqLhWdklnslrssrqApsNPseisegtvWettvnd
                      +k+ p+p++ LK+++W+kl            P ++ egtvW     +
    KIAA0666   607    KKSIPQPTNALKSFNWSKL------------PENKLEGTVW-----T 636  

                   kldeekfLynnldldeleelF.aak........ektkkakkrsvsekksk
                   ++d++k+  + ldl++le++F+a++++++   ++++k++ +++++++ s 
    KIAA0666   637 EIDDTKV-FKILDLEDLERTFsAYQrqqdffvnSNSKQKEADAIDDTLS- 684  

                   lkkkkvqqnlkilDpkrsqnpplaIllrslhcklsfeetvikeailevDe
                     k kv++ l+++D++r+qn  ++Ill+ l  kls  e  ik ail++De
    KIAA0666   685 -SKLKVKE-LSVIDGRRAQN--CNILLSRL--KLSNDE--IKRAILTMDE 726  

                   .dvlsvdlleqLlkfaPYsktkeelkklreykeddekspeeLaraeqiFl
                   +++l++d+leqLlkf P   +k+  ++l+e+k +    ++ +a a++ Fl
    KIAA0666   727 qEDLPKDMLEQLLKFVP---EKSDIDLLEEHKHE----LDRMAKADR-FL 768  

                   llisnLipyleeRlnallfkanFeeevedLkpklekveaAceeLreSkkF
                   +++s+ i ++++Rl++l fk  F+e v++ kpk e++  ++ee+ +S  +
    KIAA0666   769 FEMSR-INHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGAL 817  

                   rklLeliLaiGNyMNagsrrr.rGqAqGFkLssLlkLsdvKsadnk.tTL
                   ++lLe++La+GNyMN    +++rG+A+GFk+ssL+k++d+Ks+  k+ TL
    KIAA0666   818 KQLLEVVLAFGNYMN----KGqRGNAYGFKISSLNKIADTKSSIDKnITL 863  

                   LHflvkiirkkypdllkFysdlhhvdkaskvnleqlekdvkqlerqiknl
                   LH+l+ i+++kyp +l+++++l  +  a+kvn+ +l+k+   l+  +k++
    KIAA0666   864 LHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAV 913  

                   E..ldkggLsdpeghpddkflevmtpFlkaAkekyekLqkdlrdlktrfe
                   E++l+ ++ + p  +p dkf+ v++ F+  A+  + ++++ l + k +f 
    KIAA0666   914 EteLEYQKSQPP--QPGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFT 961  

                   klveyygedpkdrdvspeeFFkdfneFlkeFkkaaeenlaiEskrkeeEe
                   k+v+ +ge   +   +p+eFF+ f++Fl++ ++a++en   E+ rk++Ee
    KIAA0666   962 KAVKHFGEEAGK--IQPDEFFGIFDQFLQAVSEAKQEN---ENMRKKKEE 1006 

                   eerrakqlalrvketteyeqssskqkene.err...vernplmdfeverd
                   eerra+ +a   ke+ e+e++  k+ken++e  + + ++++l+ +ev ++
    KIAA0666  1007 EERRARMEA-QLKEQRERERKMRKAKENSeESGefdDLVSALRSGEVFDK 1055 

                   flgvlds...llkelrtdssfer<-*
                    l  l+ +++ +  ++tdss+er   
    KIAA0666  1056 DLSKLKRnrkRITNQMTDSSRER    1078 

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