hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09281218/chunk_1/iprscan-20080502-09281218.nocrc
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Query sequence: KIAA0661
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00184                                                  30.4    0.00024   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1     977  1015 ..     1    23 []    30.4  0.00024

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 977 to 1015: score 30.4, E = 0.00024
                   *->CpICle....pvvlpCgH.FCr.Ci..........CPlC<-*
                      Cp C  +++++v+++C H FC++C++++ + ++++CP C   
    KIAA0661   977    CPCCNTrkkdAVLTKCFHvFCFeCVrgryearqrkCPKC    1015 

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