hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09245859/chunk_1/iprscan-20080502-09245859.nocrc
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Query sequence: KIAA0659
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01764.16.fs Lipase (class 3)                                41.8    2.5e-12   1
PF01764.16.ls Lipase (class 3)                                41.8    2.1e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01764.16.fs   1/1     401   507 ..     1   127 [.    41.8  2.5e-12
PF01764.16.ls   1/1     401   541 ..     1   172 []    41.8  2.1e-09

Alignments of top-scoring domains:
PF01764.16.fs: domain 1 of 1, from 401 to 507: score 41.8, E = 2.5e-12
                   *->vvafRGTnlftilewiadldfslvpydpfflgansndtgvkeggkvh
                      v+++RGT   ++++ ++dl+   +  +  ++++           + h
    KIAA0659   401    VISIRGTL--SPKDALTDLTGDAERLPVEGHHG---------TWLGH 436  

                   kGFldaytskdqskf.kt......svrdqileelkrhLlekypdEdykiv
                   kG++ +++      + k++ +++  + + + ++l r   ++y      + 
    KIAA0659   437 KGMVLSAE------YiKKkleqemVLSQAFGRDLGR-GTKHYG-----LI 474  

                   vTGHSLGGAlAsLaAadlaenglnlssritvyTFGsP<-*
                   v+GHSLG+++A++++  l+ ++    + ++++++ +P   
    KIAA0659   475 VVGHSLGAGTAAILSFLLRPQY----PTLKCFAYSPP    507  

PF01764.16.ls: domain 1 of 1, from 401 to 541: score 41.8, E = 2.1e-09
                   *->vvafRGTnlftilewiadldfslvpydpfflgansndtgvkeggkvh
                      v+++RGT   ++++ ++dl+   +  +  ++++           + h
    KIAA0659   401    VISIRGTL--SPKDALTDLTGDAERLPVEGHHG---------TWLGH 436  

                   kGFldaytskdqskf.kt......svrdqileelkrhLlekypdEdykiv
                   kG++ +++      + k++ +++  + + + ++l r   ++y      + 
    KIAA0659   437 KGMVLSAE------YiKKkleqemVLSQAFGRDLGR-GTKHYG-----LI 474  

                   vTGHSLGGAlAsLaAadlaenglnlssritvyTFGsPRVGnkaFAeyvdi
                   v+GHSLG+++A++++  l+ ++    + ++++++ +P         +++ 
    KIAA0659   475 VVGHSLGAGTAAILSFLLRPQY----PTLKCFAYSPPGG-------LLS- 512  

                   kdieqgpyrladkvyRvvhvnDiVPrlPpalf<-*
                      e   ++ + +v  vv   D+VPr+    +   
    KIAA0659   513 ---EDAMEYSKEFVTAVVLGKDLVPRIGLSQL    541  

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