hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09180644/chunk_1/iprscan-20080502-09180644.nocrc
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Query sequence: KIAA0656
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00273                                                 174.0    1.4e-47   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00273    1/1      25   150 ..     1   137 []   174.0  1.4e-47

Alignments of top-scoring domains:
SM00273: domain 1 of 1, from 25 to 150: score 174.0, E = 1.4e-47
                   *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw
                      s ++++V+kAT+++ +gpk+khl++++q+T++++  + +++++++l+
    KIAA0656    25    SAVARAVCKATTHEVMGPKKKHLDYLIQATNETN--VNIPQMADTLF 69   

                   rRLndkgknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsdf
                   +R +++  +W+vv+KaL+++h+L+ +G+   ++++++l++rn++++Ls+f
    KIAA0656    70 ERATNS--SWVVVFKALVTTHHLMVHGN---ERFIQYLASRNTLFNLSNF 114  

                   qdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-*
                    dk    ++s+g+D++ +iR+y++yL+e++  ++++++++   
    KIAA0656   115 LDK----SGSHGYDMSTFIRRYSRYLNEKAFSYRQMAFDF    150  

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