hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09130404/chunk_1/iprscan-20080502-09130404.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0653
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00409                                                  34.4    1.6e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00409    1/1      64   177 ..     1    58 []    34.4  1.6e-05

Alignments of top-scoring domains:
SM00409: domain 1 of 1, from 64 to 177: score 34.4, E = 1.6e-05
                   *->pp.vtvkeGesvtLtC.as..........titWy.............
                       ++v +++G++v+L+C  + ++  + ++ +++W ++ +++  + + +
    KIAA0653    64    EKeVRAMVGSDVELSCaCPegsrfdlndvYVYWQtsesktvvtyhip 110  

                   .............................LtI.nvtpeDsesgGtYtCaa
                   ++++  + +++ +++   ++ +  +++ +L++ nvtp+D+     + C +
    KIAA0653   111 qnsslenvdsryrnralmspagmlrgdfsLRLfNVTPQDE---QKFHCLV 157  

                   t......sgsasseqgttLtVl<-*
                    + + +   + s   ++tL+V    
    KIAA0653   158 LsqslgfQEVLSV--EVTLHVA    177  

//