hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09094011/chunk_1/iprscan-20080502-09094011.nocrc
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Query sequence: KIAA0651
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00325                                                 225.3    5.4e-63   1
SM00109                                                  45.8    5.8e-09   1
SM00233                                                  45.5    7.1e-09   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00109     1/1     169   215 ..     1    61 []    45.8  5.8e-09
SM00325     1/1     367   559 ..     1   211 []   225.3  5.4e-63
SM00233     1/1     601   701 ..     1    82 []    45.5  7.1e-09

Alignments of top-scoring domains:
SM00109: domain 1 of 1, from 169 to 215: score 45.8, E = 5.8e-09
                   *->Hkfvfrtf.kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkC
                      H f + +++++t C+ C+ksi           +l C  C+v++H++C
    KIAA0651   169    HLFTTISVsGMTMCYACNKSITAKE-------ALICPTCNVTIHNRC 208  

                   aekvpaqshksglsC<-*
                   ++ ++        +C   
    KIAA0651   209 KDTLA--------NC    215  

SM00325: domain 1 of 1, from 367 to 559: score 225.3, E = 5.4e-63
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      v++EL+qTE ++Vr+Lki+++ f+  +++e+       l p  v+ l
    KIAA0651   367    VIYELIQTELHHVRTLKIMTRLFRTGMLEEL------HLEPGVVQGL 407  

                   FgpNieeiyefHrrFLdeLeerveewllskdl.Ksernsviedsgerigd
                   F+ +++e+ ++H+rFL +L er+++ l    +++s+rn+vi+  g+++ +
    KIAA0651   408 FP-CVDELSDIHTRFLSQLLERRRQAL----CpGSTRNFVIHRLGDLLIS 452  

                   vFlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeies
                   +F+++ sae+++k+Yse+cs+h++al+l+k+L+  + +++Fq+f++++ +
    KIAA0651   453 QFSGP-SAEQMCKTYSEFCSRHSKALKLYKELY--ARDKRFQQFIRKVTR 499  

                   kpncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLk
                    ++       r++ +++++++ QR+tkYpLL+ ++l+h++   e+r+dL+
    KIAA0651   500 PAVLK-----RHGVQECILLVTQRITKYPLLISRILQHSHGIEEERQDLT 544  

                   kAleaikelasqvNe<-*
                    Al+++kel+s v+e   
    KIAA0651   545 TALGLVKELLSNVDE    559  

SM00233: domain 1 of 1, from 601 to 701: score 45.5, E = 7.1e-09
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk.........kpkg
                      +i+ G Ll+k+  +++k++ + L ++vL++ ++k+++   ++ ++  
    KIAA0651   601    LIHDGCLLWKTaTgRFKDVLVLLMTDVLVFLQEKdqkyifptlDKPS 647  

                   sipLsgcsvre.p.....cFeivt.dr.tlllqAeseeereeWvealqsa
                   +++L++++vr+ ++ ++++F i+    + +++++ s ++r  W++ +q+ 
    KIAA0651   648 VVSLQNLIVRDiAnqekgMFLISAaPPeMYEVHTASRDDRSTWIRVIQQS 697  

                   iaka<-*
                   ++ +   
    KIAA0651   698 VRTC    701  

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