hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09011505/chunk_1/iprscan-20080502-09011505.nocrc
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Query sequence: KIAA0646
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00184                                                  39.5    4.6e-07   1
SM00240                                                  38.4    9.5e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00240    1/1      38    93 ..     1    49 []    38.4  9.5e-07
SM00184    1/1     404   441 ..     1    23 []    39.5  4.6e-07

Alignments of top-scoring domains:
SM00240: domain 1 of 1, from 38 to 93: score 38.4, E = 9.5e-07
                   *->tvtiGRss.cdivlpsps....iSRrHaeiv...dgd.yliDlgenS
                      +vt+GR+ +  ++l s+  +  iSR+H++++++++g+  + D+   S
    KIAA0646    38    EVTVGRGFgVTYQLVSKIcplmISRNHCVLKqnpEGQwTIMDNK--S 82   

                   sNGTfVNgrrv<-*
                    NG+++N+ r+   
    KIAA0646    83 LNGVWLNRARL    93   

SM00184: domain 1 of 1, from 404 to 441: score 39.5, E = 4.6e-07
                   *->CpICle....pvvlpCgH.FCr.Ci.........CPlC<-*
                      C IC e   ++v+l+C H+FC  Ci+++ +++ +CP+C   
    KIAA0646   404    CIICSEyfieAVTLNCAHsFCSyCInewmkrkieCPIC    441  

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