# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hj03808.fasta.nr -Q ../query/KIAA0646.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0646, 486 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7810418 sequences Expectation_n fit: rho(ln(x))= 5.8896+/-0.000201; mu= 8.7090+/- 0.011 mean_var=125.6310+/-24.023, 0's: 44 Z-trim: 97 B-trim: 125 in 1/66 Lambda= 0.114426 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21362894|sp|O76064.1|RNF8_HUMAN RecName: Full=E ( 485) 3233 544.9 1.7e-152 gi|30584345|gb|AAP36421.1| Homo sapiens ring finge ( 486) 3233 544.9 1.7e-152 gi|62897089|dbj|BAD96485.1| ring finger protein 8 ( 485) 3225 543.6 4.2e-152 gi|119624348|gb|EAX03943.1| ring finger protein 8, ( 485) 3223 543.3 5.2e-152 gi|90075162|dbj|BAE87261.1| unnamed protein produc ( 486) 3127 527.4 3.1e-147 gi|75061601|sp|Q5R4I2.1|RNF8_PONAB RecName: Full=E ( 486) 3117 525.8 9.7e-147 gi|109070995|ref|XP_001117035.1| PREDICTED: simila (1272) 3101 523.6 1.2e-145 gi|73972751|ref|XP_864730.1| PREDICTED: similar to ( 487) 2743 464.1 3.8e-128 gi|119624350|gb|EAX03945.1| ring finger protein 8, ( 448) 2738 463.2 6.3e-128 gi|73972753|ref|XP_864751.1| PREDICTED: similar to ( 880) 2725 461.4 4.4e-127 gi|73972755|ref|XP_538896.2| PREDICTED: similar to (1090) 2725 461.5 5.1e-127 gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN RecName: Full= ( 487) 2683 454.1 3.6e-125 gi|194040433|ref|XP_001927699.1| PREDICTED: simila ( 512) 2663 450.9 3.7e-124 gi|194390908|dbj|BAG60572.1| unnamed protein produ ( 417) 2657 449.8 6.3e-124 gi|194223467|ref|XP_001500360.2| PREDICTED: simila ( 550) 2498 423.7 6.1e-116 gi|68534363|gb|AAH99079.1| Ring finger protein 8 [ ( 487) 2313 393.1 8.8e-107 gi|21362895|sp|Q8VC56.1|RNF8_MOUSE RecName: Full=E ( 488) 2260 384.3 3.8e-104 gi|118088051|ref|XP_419487.2| PREDICTED: hypotheti ( 523) 1818 311.4 3.7e-82 gi|149549697|ref|XP_001511244.1| PREDICTED: simila ( 573) 1667 286.5 1.2e-74 gi|162329958|pdb|2PIE|A Chain A, Crystal Structure ( 138) 943 166.3 4.5e-39 gi|159163929|pdb|2CSW|A Chain A, Solution Structur ( 145) 931 164.4 1.8e-38 gi|47123933|gb|AAH70792.1| Rnf8-b-prov protein [Xe ( 532) 920 163.1 1.6e-37 gi|8052306|emb|CAB92239.1| AIP37 protein [Mus musc ( 275) 913 161.7 2.2e-37 gi|28279440|gb|AAH46256.1| Rnf8-prov protein [Xeno ( 540) 890 158.2 4.9e-36 gi|195539833|gb|AAI68076.1| Unknown (protein for M ( 342) 802 143.5 8.5e-32 gi|27882568|gb|AAH44545.1| Zgc:55936 [Danio rerio] ( 485) 785 140.8 7.5e-31 gi|41351026|gb|AAH65643.1| Zgc:55936 [Danio rerio] ( 531) 784 140.7 8.9e-31 gi|149269142|ref|XP_001479559.1| PREDICTED: simila ( 202) 743 133.5 5.1e-29 gi|149043520|gb|EDL96971.1| ring finger protein 8, ( 126) 673 121.7 1.1e-25 gi|148690679|gb|EDL22626.1| ring finger protein 8 ( 146) 666 120.6 2.7e-25 gi|210082441|gb|EEA31153.1| hypothetical protein B ( 461) 503 94.2 7.5e-17 gi|47224345|emb|CAG09191.1| unnamed protein produc ( 540) 502 94.2 9.3e-17 gi|115873145|ref|XP_788216.2| PREDICTED: hypotheti ( 558) 487 91.7 5.3e-16 gi|156227792|gb|EDO48594.1| predicted protein [Nem ( 974) 406 78.6 8.2e-12 gi|221132437|ref|XP_002157712.1| PREDICTED: simila ( 590) 375 73.2 2e-10 gi|193652771|ref|XP_001943772.1| PREDICTED: simila ( 377) 343 67.7 5.8e-09 gi|212511601|gb|EEB14530.1| RING finger protein, p ( 390) 342 67.6 6.7e-09 gi|215491964|gb|EEC01605.1| hypothetical protein I ( 314) 311 62.4 2e-07 gi|193652775|ref|XP_001943872.1| PREDICTED: simila ( 354) 308 61.9 3.1e-07 gi|149043522|gb|EDL96973.1| ring finger protein 8, ( 55) 293 58.6 4.9e-07 gi|124422128|emb|CAK86976.1| unnamed protein produ ( 229) 267 55.0 2.5e-05 gi|124428432|emb|CAK93205.1| unnamed protein produ ( 229) 263 54.3 3.9e-05 gi|124399550|emb|CAK65041.1| unnamed protein produ ( 293) 248 51.9 0.00026 gi|89308108|gb|EAS06096.1| hypothetical protein TT ( 535) 241 51.1 0.00087 gi|149043521|gb|EDL96972.1| ring finger protein 8, ( 76) 229 48.2 0.00092 gi|124430119|emb|CAK94907.1| unnamed protein produ ( 229) 233 49.3 0.0012 gi|110757420|ref|XP_001120455.1| PREDICTED: hypoth ( 663) 238 50.7 0.0014 gi|118090486|ref|XP_420695.2| PREDICTED: similar t ( 721) 236 50.4 0.0019 gi|60468844|gb|EAL66844.1| SAP DNA-binding domain- (1097) 238 50.9 0.002 gi|60464424|gb|EAL62571.1| hypothetical protein DD (1419) 238 51.0 0.0024 >>gi|21362894|sp|O76064.1|RNF8_HUMAN RecName: Full=E3 ub (485 aa) initn: 3233 init1: 3233 opt: 3233 Z-score: 2894.1 bits: 544.9 E(): 1.7e-152 Smith-Waterman score: 3233; 100.000% identity (100.000% similar) in 485 aa overlap (2-486:1-485) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER 420 430 440 450 460 470 KIAA06 KAKRLF :::::: gi|213 KAKRLF 480 >>gi|30584345|gb|AAP36421.1| Homo sapiens ring finger pr (486 aa) initn: 3233 init1: 3233 opt: 3233 Z-score: 2894.1 bits: 544.9 E(): 1.7e-152 Smith-Waterman score: 3233; 100.000% identity (100.000% similar) in 485 aa overlap (2-486:1-485) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER 420 430 440 450 460 470 KIAA06 KAKRLF :::::: gi|305 KAKRLFL 480 >>gi|62897089|dbj|BAD96485.1| ring finger protein 8 isof (485 aa) initn: 3225 init1: 3225 opt: 3225 Z-score: 2887.0 bits: 543.6 E(): 4.2e-152 Smith-Waterman score: 3225; 99.588% identity (100.000% similar) in 485 aa overlap (2-486:1-485) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|628 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEAHHEQKASNS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|628 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGERDLKQQLAQALQEHWALMEELNRSKK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER 420 430 440 450 460 470 KIAA06 KAKRLF :::::: gi|628 KAKRLF 480 >>gi|119624348|gb|EAX03943.1| ring finger protein 8, iso (485 aa) initn: 3223 init1: 3223 opt: 3223 Z-score: 2885.2 bits: 543.3 E(): 5.2e-152 Smith-Waterman score: 3223; 99.588% identity (100.000% similar) in 485 aa overlap (2-486:1-485) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER 420 430 440 450 460 470 KIAA06 KAKRLF :..::: gi|119 KGERLF 480 >>gi|90075162|dbj|BAE87261.1| unnamed protein product [M (486 aa) initn: 1736 init1: 1736 opt: 3127 Z-score: 2799.6 bits: 527.4 E(): 3.1e-147 Smith-Waterman score: 3127; 97.119% identity (98.971% similar) in 486 aa overlap (2-486:1-486) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::: ::::::::::::::::::::: ::::::::::::::::::::::: gi|900 MGEPGFFVTGDRARGRSWCLRRVGMSAGWLLLEDGREVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV ::::::::::::::::::::::::::::::::::::::::.:.::::::::::::::::: gi|900 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDQLGGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSK-TTGAPIYPGFPKVTEVHHEQKASN ::::.: ::::::::::::::.::::::::::::: ::::::::::: :::::::::::: gi|900 SCESSQSVKSQGKGEVASTPSENLDPKLTALEPSKKTTGAPIYPGFPIVTEVHHEQKASN 180 190 200 210 220 230 240 250 260 270 280 290 KIAA06 SSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQ ::::::::::::::::::::::::::::::::::::::::::::::.:.::::::::::: gi|900 SSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKIVRMEQELQDLQSQ 240 250 260 270 280 290 300 310 320 330 340 350 KIAA06 LCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSK :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|900 LCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSK 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 KDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|900 KDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 AHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|900 AHSFCSYCINEWMKRKIECPICRKDIESKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE 420 430 440 450 460 470 480 KIAA06 RKAKRLF ::::::: gi|900 RKAKRLF 480 >>gi|75061601|sp|Q5R4I2.1|RNF8_PONAB RecName: Full=E3 ub (486 aa) initn: 1704 init1: 1704 opt: 3117 Z-score: 2790.6 bits: 525.8 E(): 9.7e-147 Smith-Waterman score: 3117; 96.502% identity (98.560% similar) in 486 aa overlap (2-486:1-486) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|750 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLSVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|750 YEYEVTEEDWETIYPCLSPKNDQVIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSK-TTGAPIYPGFPKVTEVHHEQKASN :::::: :::::::::.::::.:::::::.::::: ::::::: :::::::::::: ::: gi|750 SCESGQSVKSQGKGEVSSTPSENLDPKLTVLEPSKKTTGAPIYLGFPKVTEVHHEQTASN 180 190 200 210 220 230 240 250 260 270 280 290 KIAA06 SSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQ ::::::.:::::::::::::::::::::::::::::::::::::::.::::::: ::::: gi|750 SSASQRGLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKIVQMEQELLDLQSQ 240 250 260 270 280 290 300 310 320 330 340 350 KIAA06 LCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSK ::::::::::::::::::::::::::: :::::::.::.::::::::::::::::::::: gi|750 LCAEQAQQQARVEQLEKTFQEEEQHLQDLEIAQGEEDLRQQLAQALQEHWALMEELNRSK 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 KDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|750 KDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 AHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 AHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE 420 430 440 450 460 470 480 KIAA06 RKAKRLF ::.:::: gi|750 RKVKRLF 480 >>gi|109070995|ref|XP_001117035.1| PREDICTED: similar to (1272 aa) initn: 1712 init1: 1712 opt: 3101 Z-score: 2771.3 bits: 523.6 E(): 1.2e-145 Smith-Waterman score: 3101; 97.095% identity (98.963% similar) in 482 aa overlap (2-482:1-482) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::: ::::::::::::::::::::: ::::::::::::::::::::::: gi|109 MGEPGFFVTGDRARGRSWCLRRVGMSAGWLLLEDGREVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV ::::::::::::::::::::::::::::::::::::::::.:.::::::::::::::::: gi|109 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDQLGGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPS-KTTGAPIYPGFPKVTEVHHEQKASN ::::.: ::::::::::::::.:::::::::::: :::::::::::: :::::::::::: gi|109 SCESSQSVKSQGKGEVASTPSENLDPKLTALEPSTKTTGAPIYPGFPIVTEVHHEQKASN 180 190 200 210 220 230 240 250 260 270 280 290 KIAA06 SSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQ ::::::::::::::::::::::::::::::::::::::::::::::.:.::::::::::: gi|109 SSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKIVRMEQELQDLQSQ 240 250 260 270 280 290 300 310 320 330 340 350 KIAA06 LCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSK :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 LCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSK 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 KDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 KDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNC 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 AHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|109 AHSFCSYCINEWMKRKIECPICRKDIESKTYSLVLDNCINKMVNNLSSEVKERRIVLIRE 420 430 440 450 460 470 480 KIAA06 RKAKRLF ::: gi|109 RKASTTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFRE 480 490 500 510 520 530 >>gi|73972751|ref|XP_864730.1| PREDICTED: similar to Ubi (487 aa) initn: 1495 init1: 1495 opt: 2743 Z-score: 2457.0 bits: 464.1 E(): 3.8e-128 Smith-Waterman score: 2743; 85.597% identity (93.621% similar) in 486 aa overlap (2-485:1-486) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI : ::: .::::::::: :::::. :.: ::::::: :::.::::::::::::::::::: gi|739 MEEPGSLVTGDRAGGRRWCLRRARMNAEWLLLEDGNEVTIGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::: ::::::::::::::::::: :::::.:::::.::.:::::::::::::: gi|739 SRNHCVLKQNVEGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV ::::::::::: .::::.:::::.: ::. :::::::::::: ::::::::.:::::.:: gi|739 YEYEVTEEDWERMYPCLAPKNDQIIGKNRGLRTKRKFSLDELEGPGAEGPSHLKSKISKV 120 130 140 150 160 170 190 200 210 220 230 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPS-KTTGAPIYPGFPKVTEVHHE-QKAS : . ::::::.::::::: ::. ::::::.:: : :.: : .::. ::. .::. :::: gi|739 SYKPGQPVKSHGKGEVASQPSEYLDPKLTSLELSEKATDAHVYPSSTKVVALHHKKQKAS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA06 NSSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQS . :::: ::..:::::::::.:: :::::. ::.:::.:::::::::.:.::.::::::: gi|739 SPSASQSSLELFKVTMSRILKLKTQMQEKQVAVLNVKRQTQKGNSKKIVKMEKELQDLQS 240 250 260 270 280 290 300 310 320 330 340 350 KIAA06 QLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRS ::::::::::::::::::::::::::::::: :::.::::::::::::: ::::::::: gi|739 QLCAEQAQQQARVEQLEKTFQEEEQHLQGLEKDQGEEDLKQQLAQALQEHRALMEELNRS 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 KKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 KKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLN 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 CAHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIR :::::::::::::::::.:::::::::::::.::::::::::::.:::::::.::::::: gi|739 CAHSFCSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDNLSSEVKDRRIVLIR 420 430 440 450 460 470 480 KIAA06 ERKAKRLF ::::::: gi|739 ERKAKRLS 480 >>gi|119624350|gb|EAX03945.1| ring finger protein 8, iso (448 aa) initn: 2738 init1: 2738 opt: 2738 Z-score: 2452.9 bits: 463.2 E(): 6.3e-128 Smith-Waterman score: 2738; 100.000% identity (100.000% similar) in 412 aa overlap (2-413:1-412) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNS 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQL 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEQRDCSED 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 HSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRER gi|119 RALRAFERLPGSASLRWSGGFSLAVTPLL 420 430 440 >>gi|73972753|ref|XP_864751.1| PREDICTED: similar to CG6 (880 aa) initn: 1477 init1: 1477 opt: 2725 Z-score: 2437.8 bits: 461.4 E(): 4.4e-127 Smith-Waterman score: 2725; 85.507% identity (93.582% similar) in 483 aa overlap (2-482:1-483) 10 20 30 40 50 60 KIAA06 AMGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMI : ::: .::::::::: :::::. :.: ::::::: :::.::::::::::::::::::: gi|739 MEEPGSLVTGDRAGGRRWCLRRARMNAEWLLLEDGNEVTIGRGFGVTYQLVSKICPLMI 10 20 30 40 50 70 80 90 100 110 120 KIAA06 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE :::::::::: ::::::::::::::::::: :::::.:::::.::.:::::::::::::: gi|739 SRNHCVLKQNVEGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLGVPLENKENAE 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 YEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKV ::::::::::: .::::.:::::.: ::. :::::::::::: ::::::::.:::::.:: gi|739 YEYEVTEEDWERMYPCLAPKNDQIIGKNRGLRTKRKFSLDELEGPGAEGPSHLKSKISKV 120 130 140 150 160 170 190 200 210 220 230 KIAA06 SCESGQPVKSQGKGEVASTPSDNLDPKLTALEPS-KTTGAPIYPGFPKVTEVHHE-QKAS : . ::::::.::::::: ::. ::::::.:: : :.: : .::. ::. .::. :::: gi|739 SYKPGQPVKSHGKGEVASQPSEYLDPKLTSLELSEKATDAHVYPSSTKVVALHHKKQKAS 180 190 200 210 220 230 240 250 260 270 280 290 KIAA06 NSSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQS . :::: ::..:::::::::.:: :::::. ::.:::.:::::::::.:.::.::::::: gi|739 SPSASQSSLELFKVTMSRILKLKTQMQEKQVAVLNVKRQTQKGNSKKIVKMEKELQDLQS 240 250 260 270 280 290 300 310 320 330 340 350 KIAA06 QLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRS ::::::::::::::::::::::::::::::: :::.::::::::::::: ::::::::: gi|739 QLCAEQAQQQARVEQLEKTFQEEEQHLQGLEKDQGEEDLKQQLAQALQEHRALMEELNRS 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 KKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 KKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHVNDVLENELQCIICSEYFIEAVTLN 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 CAHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIR :::::::::::::::::.:::::::::::::.::::::::::::.:::::::.::::::: gi|739 CAHSFCSYCINEWMKRKVECPICRKDIKSKTHSLVLDNCINKMVDNLSSEVKDRRIVLIR 420 430 440 450 460 470 480 KIAA06 ERKAKRLF :::: gi|739 ERKASATSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFK 480 490 500 510 520 530 486 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 12:08:39 2009 done: Thu Mar 5 12:12:48 2009 Total Scan time: 1477.620 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]