hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-08593805/chunk_1/iprscan-20080502-08593805.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0645 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00610.11.ls Domain found in Dishevelled, Egl-10, and Ple 84.4 3.1e-22 1 PF00610.11.fs Domain found in Dishevelled, Egl-10, and Ple 82.5 1.2e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00610.11.fs 1/1 1162 1235 .. 1 80 [] 82.5 1.2e-21 PF00610.11.ls 1/1 1162 1235 .. 1 80 [] 84.4 3.1e-22 Alignments of top-scoring domains: PF00610.11.fs: domain 1 of 1, from 1162 to 1235: score 82.5, E = 1.2e-21 *->pesgvklkdrkwlkkvipncFtGselVdWLmdnlsgiidrkeAlhla p++gv+l ++k + p+cF+ +e+V+WL+++++gi+++++A+ ++ KIAA0645 1162 PSTGVQLL--SEQKGLSPYCFISAEVVHWLVNHVEGIQTQAMAIDIM 1206 qlLlkeGyirhvgdhltgkndhtFldkqtyYrf<-* q++l+e +i+h+ +g+ ++tF ++ ++Y + KIAA0645 1207 QKMLEEQLITHA----SGEAWRTFIYGFYFYKI 1235 PF00610.11.ls: domain 1 of 1, from 1162 to 1235: score 84.4, E = 3.1e-22 *->pesgvklkdrkwlkkvipncFtGselVdWLmdnlsgiidrkeAlhla p++gv+l ++k + p+cF+ +e+V+WL+++++gi+++++A+ ++ KIAA0645 1162 PSTGVQLL--SEQKGLSPYCFISAEVVHWLVNHVEGIQTQAMAIDIM 1206 qlLlkeGyirhvgdhltgkndhtFldkqtyYrf<-* q++l+e +i+h+ +g+ ++tF ++ ++Y + KIAA0645 1207 QKMLEEQLITHA----SGEAWRTFIYGFYFYKI 1235 //