hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-08525864/chunk_1/iprscan-20080502-08525864.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0641 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF07714.7.fs Protein tyrosine kinase 221.5 3.6e-64 2 PF07714.7.ls Protein tyrosine kinase 216.5 5.4e-62 1 PF00069.15.fs Protein kinase domain 78.9 2.7e-22 1 PF00069.15.ls Protein kinase domain 80.3 5.6e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 77 343 .. 1 281 [. 78.9 2.7e-22 PF07714.7.fs 1/2 77 252 .. 1 186 [. 166.4 3.6e-48 PF07714.7.ls 1/1 77 347 .. 1 272 [] 216.5 5.4e-62 PF00069.15.ls 1/1 77 347 .. 1 287 [] 80.3 5.6e-21 PF07714.7.fs 2/2 272 347 .. 199 272 .] 55.1 6.5e-16 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 77 to 343: score 78.9, E = 2.7e-22 *->yelleklGsGsfGtVykakhkgtgk...iVAvKiikkrkekskkdkt + l+ +G+G fG+V+++ ++++g+++ +V+vK++ + ++ KIAA0641 77 LLYLKEIGRGWFGKVFLG-EVNSGIssaQVVVKELQASASVQ--EQM 120 arrlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdy ++ E+q + L+H N ++++ + + + + lV+E+c+ G dL+ y KIAA0641 121 QFLE-EVQPYRALKHSNLLQCLAQCAEVTPYLLVMEFCPLG----DLKGY 165 lsetrrkgpllfse......deakkialQilrgleYLHsngiiHRDLKPe l+ ++++ e+ +++++++++a ++++g+ +LH+n+++H DL + KIAA0641 166 LR----SCRV--AEsmapdpRTLQRMACEVACGVLHLHRNNFVHSDLALR 209 NILldnngvvdaflKiaDFGlAkkls.t.sss.lttfvGTpwYmAPEv.. N+Ll + +v Ki+D GlA ++++++ ++++ + + ++++APE+ + KIAA0641 210 NCLLTADLTV----KIGDYGLAHCKYrEdYFVtADQLWVPLRWIAPELvd 255 .....llggngygtkvDvWSlGvilyellt.GkpPFs.gevqdsldqlql + +++ll + +++ vWSlGv+++el+ G P+++++ dq++l KIAA0641 256 evhsnLL-VVDQTKSGNVWSLGVTIWELFElGTQPYPqHS-----DQQVL 299 irkilgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRl + +++ +l+ + p+ + s+ +++ c+ + P++R+ KIAA0641 300 AYTVREQQLKLPKPQLQLTL----------SDRWYEVMQFCW-LQPEQRP 338 taeei<-* taee+ KIAA0641 339 TAEEV 343 PF07714.7.fs: domain 1 of 2, from 77 to 252: score 166.4, E = 3.6e-48 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie l +k++G+G FG+V++G+ + + +V VK L +as +e KIAA0641 77 LLYLKEIGRGWFGKVFLGEVN--SGISSAQVVVKELQA-SASVQE-- 118 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL + Fl+E++ + l +H N++++l+ c + P +++V+E++++GdL KIAA0641 119 QMQFLEEVQPYRAL-KHSNLLQCLAQCAE-VTP----YLLVMEFCPLGDL 162 ldfLrkhr..egrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcL + +Lr+ r e +++ +L +a ++A+G +L+++nfvH DLA RNcL KIAA0641 163 KGYLRSCRvaESMAPDPRTLQRMACEVACGVLHLHRNNFVHSDLALRNCL 212 VsenlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPE<-* ++ +l+VKI+D GLa y +dy ++ + +P +W APE KIAA0641 213 LTADLTVKIGDYGLAHCKYREDYF-VTADQLWVPLRWIAPE 252 PF07714.7.ls: domain 1 of 1, from 77 to 347: score 216.5, E = 5.4e-62 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie l +k++G+G FG+V++G+ + + +V VK L +as +e KIAA0641 77 LLYLKEIGRGWFGKVFLGEVN--SGISSAQVVVKELQA-SASVQE-- 118 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL + Fl+E++ + l +H N++++l+ c + P +++V+E++++GdL KIAA0641 119 QMQFLEEVQPYRAL-KHSNLLQCLAQCAE-VTP----YLLVMEFCPLGDL 162 ldfLrkhr..egrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcL + +Lr+ r e +++ +L +a ++A+G +L+++nfvH DLA RNcL KIAA0641 163 KGYLRSCRvaESMAPDPRTLQRMACEVACGVLHLHRNNFVHSDLALRNCL 212 VsenlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygk... ++ +l+VKI+D GLa y +dy ++ + +P +W APE + ++ KIAA0641 213 LTADLTVKIGDYGLAHCKYREDYF-VTADQLWVPLRWIAPELVDEVHsnl 261 .........FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyed ++++++ VWS GV++WE+f lG qP Yp s+++vl++ + KIAA0641 262 lvvdqtksgN-----VWSLGVTIWELFELGTQP-YPQHSDQQVLAYT-VR 304 GyRLprPenCP.......delYdlMlqCWaedPedRPtFselveeL<-* ++L+ P+ P+ + + +d Y++M+ CW +Pe+RPt +e++ L KIAA0641 305 EQQLKLPK--PqlqltlsDRWYEVMQFCW-LQPEQRPTAEEVHLLL 347 PF00069.15.ls: domain 1 of 1, from 77 to 347: score 80.3, E = 5.6e-21 *->yelleklGsGsfGtVykakhkgtgk...iVAvKiikkrkekskkdkt + l+ +G+G fG+V+++ ++++g+++ +V+vK++ + ++ KIAA0641 77 LLYLKEIGRGWFGKVFLG-EVNSGIssaQVVVKELQASASVQ--EQM 120 arrlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdy ++ E+q + L+H N ++++ + + + + lV+E+c+ G dL+ y KIAA0641 121 QFLE-EVQPYRALKHSNLLQCLAQCAEVTPYLLVMEFCPLG----DLKGY 165 lsetrrkgpllfse......deakkialQilrgleYLHsngiiHRDLKPe l+ ++++ e+ +++++++++a ++++g+ +LH+n+++H DL + KIAA0641 166 LR----SCRV--AEsmapdpRTLQRMACEVACGVLHLHRNNFVHSDLALR 209 NILldnngvvdaflKiaDFGlAkkls.t.sss.lttfvGTpwYmAPEv.. N+Ll + +v Ki+D GlA ++++++ ++++ + + ++++APE+ + KIAA0641 210 NCLLTADLTV----KIGDYGLAHCKYrEdYFVtADQLWVPLRWIAPELvd 255 .....llggngygtkvDvWSlGvilyellt.GkpPFs.gevqdsldqlql + +++ll + +++ vWSlGv+++el+ G P+++++ dq++l KIAA0641 256 evhsnLL-VVDQTKSGNVWSLGVTIWELFElGTQPYPqHS-----DQQVL 299 irkilgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRl + +++ +l+ + p+ + s+ +++ c+ + P++R+ KIAA0641 300 AYTVREQQLKLPKPQLQLTL----------SDRWYEVMQFCW-LQPEQRP 338 taeeilqHPwf<-* taee+ + KIAA0641 339 TAEEVHLL--L 347 PF07714.7.fs: domain 2 of 2, from 272 to 347: score 55.1, E = 6.5e-16 *->VWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCP. VWS GV++WE+f lG qP Yp s+++vl++ + ++L+ P+ P+ KIAA0641 272 VWSLGVTIWELFELGTQP-YPQHSDQQVLAYT-VREQQLKLPK--Pq 314 ......delYdlMlqCWaedPedRPtFselveeL<-* + + +d Y++M+ CW +Pe+RPt +e++ L KIAA0641 315 lqltlsDRWYEVMQFCW-LQPEQRPTAEEVHLLL 347 //