hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08412441/chunk_1/iprscan-20080502-08412441.nocrc
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Query sequence: KIAA0634
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00457                                                 200.4    1.7e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00457    1/1     833  1017 ..     1   232 []   200.4  1.7e-55

Alignments of top-scoring domains:
SM00457: domain 1 of 1, from 833 to 1017: score 200.4, E = 1.7e-55
                   *->qflvardtVrvrlytvkldesdlplaleFlkalrdLpdqynsanspd
                      +++v++++Vr++ly+vkl   +++la++F+++l+ L+++ +++    
    KIAA0634   833    YPMVQQWRVRSNLYRVKLS--TITLAAGFTNVLKILTKESSRE---- 873  

                   qayarfiddYGTHYitSatlGGeyslllvldkeslerkgwltsediskcl
                    ++  fi++YG HYi++a +G e++++++++++++++++wl++++++++l
    KIAA0634   874 -ELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTEL 922  

                   ngeakvelassnlvagsvsaemkhctqssssskslstresqtvrlshtqv
                   +              ++ + +    + + +++  l t +    +ls++q 
    KIAA0634   923 G--------------SKKELK---SMPFITYLSGLLTAQ----MLSDDQL 951  

                   lGGaseaievledlergrkgclqsnsldfseWaesvpneaPvlidvksla
                   + G    +e+++ +e+gr  c+++++l+++  +e++  + Pvl++++++ 
    KIAA0634   952 ISG----VEIRC-EEKGR--CPSTCHLCRRPGKEQLSPT-PVLLEINRVV 993  

                   PiyeLlpespfpvlvaleaspkreaLrqAlesYlk<-*
                   P+y+L++++            ++ea++ Al+s+++   
    KIAA0634   994 PLYTLIQDN-----------GTKEAFKSALMSSYW    1017 

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