hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08394290/chunk_1/iprscan-20080502-08394290.nocrc
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Query sequence: KIAA0633
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00246                                                  75.0    9.5e-18   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00246    1/3    1164  1184 ..     1    19 []    22.4    0.065
SM00246    2/3    1204  1224 ..     1    19 []    27.0   0.0027
SM00246    3/3    1292  1312 ..     1    19 []    25.6   0.0067

Alignments of top-scoring domains:
SM00246: domain 1 of 3, from 1164 to 1184: score 22.4, E = 0.065
                   *->aRsaLLaqIr..gqGkkLKKv<-*
                       +saL+++I++ g++ +L+K+   
    KIAA0633  1164    LHSALMEAIHsaGGKDRLRKT    1184 

SM00246: domain 2 of 3, from 1204 to 1224: score 27.0, E = 0.0027
                   *->aRsaLLaqIr..gqGkkLKKv<-*
                       RsaLLa+Ir++++ ++L+Kv   
    KIAA0633  1204    ERSALLAAIRghSGTCSLRKV    1224 

SM00246: domain 3 of 3, from 1292 to 1312: score 25.6, E = 0.0067
                   *->aRsaLLaqIr..gqGkkLKKv<-*
                      aR+aL+++Ir++++ ++L+Kv   
    KIAA0633  1292    ARQALMDAIRsgTGAARLRKV    1312 

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