hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08394290/chunk_1/iprscan-20080502-08394290.nocrc
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Query sequence: KIAA0633
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02205.10.ls WH2 motif                                       89.4      1e-23   3
PF02205.10.fs WH2 motif                                       83.4    3.8e-23   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02205.10.fs   1/3    1164  1184 ..     1    21 []    25.7  2.4e-06
PF02205.10.ls   1/3    1164  1184 ..     1    21 []    27.7  3.7e-05
PF02205.10.fs   2/3    1204  1224 ..     1    21 []    30.3  1.2e-07
PF02205.10.ls   2/3    1204  1224 ..     1    21 []    32.3  1.6e-06
PF02205.10.fs   3/3    1292  1312 ..     1    21 []    27.4  7.8e-07
PF02205.10.ls   3/3    1292  1312 ..     1    21 []    29.4  1.1e-05

Alignments of top-scoring domains:
PF02205.10.fs: domain 1 of 3, from 1164 to 1184: score 25.7, E = 2.4e-06
                   *->aRsaLLaaIrsagqGikLKKv<-*
                       +saL++aI+sag++ +L+K+   
    KIAA0633  1164    LHSALMEAIHSAGGKDRLRKT    1184 

PF02205.10.ls: domain 1 of 3, from 1164 to 1184: score 27.7, E = 3.7e-05
                   *->aRsaLLaaIrsagqGikLKKv<-*
                       +saL++aI+sag++ +L+K+   
    KIAA0633  1164    LHSALMEAIHSAGGKDRLRKT    1184 

PF02205.10.fs: domain 2 of 3, from 1204 to 1224: score 30.3, E = 1.2e-07
                   *->aRsaLLaaIrsagqGikLKKv<-*
                       RsaLLaaIr++++ ++L+Kv   
    KIAA0633  1204    ERSALLAAIRGHSGTCSLRKV    1224 

PF02205.10.ls: domain 2 of 3, from 1204 to 1224: score 32.3, E = 1.6e-06
                   *->aRsaLLaaIrsagqGikLKKv<-*
                       RsaLLaaIr++++ ++L+Kv   
    KIAA0633  1204    ERSALLAAIRGHSGTCSLRKV    1224 

PF02205.10.fs: domain 3 of 3, from 1292 to 1312: score 27.4, E = 7.8e-07
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      aR+aL++aIrs+++ ++L+Kv   
    KIAA0633  1292    ARQALMDAIRSGTGAARLRKV    1312 

PF02205.10.ls: domain 3 of 3, from 1292 to 1312: score 29.4, E = 1.1e-05
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      aR+aL++aIrs+++ ++L+Kv   
    KIAA0633  1292    ARQALMDAIRSGTGAARLRKV    1312 

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