hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08330203/chunk_1/iprscan-20080502-08330203.nocrc
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Query sequence: KIAA0629
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05716.3.fs A-kinase anchor protein 110 kDa (AKAP 110)      13.6    0.00028   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05716.3.fs   1/1    1196  1272 .]   891   977 .]    13.6  0.00028

Alignments of top-scoring domains:
PF05716.3.fs: domain 1 of 1, from 1196 to 1272: score 13.6, E = 0.00028
                   *->qlqAvlqwvAAselNrvPilyfagddegiqekLlqlSAkAveKGySV
                      ql  +lqw  Ase   v  lyf   d  + e +l lS +  eKG  V
    KIAA0629  1196    QLRIILQWLIASEAE-VAELYFH--DSANKEFML-LSKQLQEKGWKV 1238 

                   GevLQsVlryeKERQlDEaverwpGNvtrlQLLDWlmvnL<-*
                   G++LQ Vl+y       E++e+       + L DWl+ n    
    KIAA0629  1239 GDLLQAVLQYY------EVMEKASSEERCKSLFDWLLENA    1272 

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