hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08311940/chunk_1/iprscan-20080502-08311940.nocrc
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Query sequence: KIAA0628
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 365.4   3.5e-105  13

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/13    127   149 ..     1    23 []    21.1     0.16
SM00355      2/13    155   177 ..     1    23 []    29.4  0.00051
SM00355      3/13    183   205 ..     1    23 []    28.6  0.00086
SM00355      4/13    211   233 ..     1    23 []    27.3   0.0021
SM00355      5/13    239   261 ..     1    23 []    28.8  0.00073
SM00355      6/13    267   289 ..     1    23 []    31.1  0.00016
SM00355      7/13    295   317 ..     1    23 []    32.7  5.2e-05
SM00355      8/13    323   345 ..     1    23 []    28.1   0.0012
SM00355      9/13    351   373 ..     1    23 []    29.8  0.00038
SM00355     10/13    379   401 ..     1    23 []    26.4    0.004
SM00355     11/13    407   429 ..     1    23 []    29.2  0.00057
SM00355     12/13    435   457 ..     1    23 []    23.3    0.033
SM00355     13/13    463   485 ..     1    23 []    29.7  0.00041

Alignments of top-scoring domains:
SM00355: domain 1 of 13, from 127 to 149: score 21.1, E = 0.16
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                        C+i Cgk+f+  ++L+rH  +H   
    KIAA0628   127    NPCDI-CGKTFTFNsDLVRHRISH    149  

SM00355: domain 2 of 13, from 155 to 177: score 29.4, E = 0.00051
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f + ++L +H+r+H   
    KIAA0628   155    YTCDQ-CGKGFGQSsHLMEHQRIH    177  

SM00355: domain 3 of 13, from 183 to 205: score 28.6, E = 0.00086
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f +++ L++H+rvH   
    KIAA0628   183    YVCNV-CGKDFIHYsGLIEHQRVH    205  

SM00355: domain 4 of 13, from 211 to 233: score 27.3, E = 0.0021
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC + Cgk f++ ++L+rH+rvH   
    KIAA0628   211    FKCAQ-CGKAFCHSsDLIRHQRVH    233  

SM00355: domain 5 of 13, from 239 to 261: score 28.8, E = 0.00073
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk fs+ + L+rH+r+H   
    KIAA0628   239    FECKE-CGKGFSQSsLLIRHQRIH    261  

SM00355: domain 6 of 13, from 267 to 289: score 31.1, E = 0.00016
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgksf + ++L+rH+++H   
    KIAA0628   267    YECNE-CGKSFIRSsSLIRHYQIH    289  

SM00355: domain 7 of 13, from 295 to 317: score 32.7, E = 5.2e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f+++++L++H+r+H   
    KIAA0628   295    YECKE-CGKAFRHRsDLIEHQRIH    317  

SM00355: domain 8 of 13, from 323 to 345: score 28.1, E = 0.0012
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk f + + L++H+r+H   
    KIAA0628   323    FECNE-CGKAFIRSsKLIQHQRIH    345  

SM00355: domain 9 of 13, from 351 to 373: score 29.8, E = 0.00038
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk+fs+ +++++H+r+H   
    KIAA0628   351    YVCNE-CGKRFSQTsNFTQHQRIH    373  

SM00355: domain 10 of 13, from 379 to 401: score 26.4, E = 0.004
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f   + L+rH+++H   
    KIAA0628   379    YECNE-CGKAFFLSsYLIRHQKIH    401  

SM00355: domain 11 of 13, from 407 to 429: score 29.2, E = 0.00057
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f +k +L++H+++H   
    KIAA0628   407    YECKE-CGKAFLQKaHLTEHQKIH    429  

SM00355: domain 12 of 13, from 435 to 457: score 23.3, E = 0.033
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  Cgk f + + L  H+ +H   
    KIAA0628   435    FECKD-CGKAFIQSsKLLLHQIIH    457  

SM00355: domain 13 of 13, from 463 to 485: score 29.7, E = 0.00041
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f +++++ +H+++H   
    KIAA0628   463    YVCSY-CGKGFIQRsNFLQHQKIH    485  

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