hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080909/iprscan-20080909-09385525/chunk_1/iprscan-20080909-09385525.nocrc
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Query sequence: KIAA0627
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     60.4    5.6e-15   5
PF02985.12.fs HEAT repeat                                     53.1    6.7e-14   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   4/5    1127  1163 ..     1    36 []    24.3  0.00041
PF02985.12.ls   5/5    1245  1281 ..     1    36 []    23.6  0.00065

Alignments of top-scoring domains:
PF02985.12.ls: domain 4 of 5, from 1127 to 1163: score 24.3, E = 0.00041
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++++++l lll+ l+D++p +R+ A++ L +++++    
    KIAA0627  1127    DeHFKTILLLLLETLGDKEPTIRALALKVLREILRHQ    1163 

PF02985.12.ls: domain 5 of 5, from 1245 to 1281: score 23.6, E = 0.00065
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + +l+e++p l+++ + ++++VR+a++++L+a+  v+   
    KIAA0627  1245    NlLLPEIMPGLIQGYDNSESSVRKACVFCLVAVHAVI    1281 

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