hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08275512/chunk_1/iprscan-20080502-08275512.nocrc
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Query sequence: KIAA0626
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00408                                                  58.4    9.4e-13   1
SM00409                                                  58.2      1e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00409    1/1      77   167 ..     1    58 []    58.2    1e-12
SM00408    1/1      83   156 ..     1    56 []    58.4  9.4e-13

Alignments of top-scoring domains:
SM00409: domain 1 of 1, from 77 to 167: score 58.2, E = 1e-12
                   *->pp.vtvkeGesvtLtC.as.....titWy..................
                        ++ vkeG s+ ++C++ + ++++++Wy++ ++  +   + + +++
    KIAA0626    77    TDhIIVKEGNSALINCsVYgipdpQFKWYnsigkllkeeedekergg 123  

                   ..........LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<
                   ++ + ++++ L+I++v+++D    G YtC+a++ +g++    ++tL+V  
    KIAA0626   124 gkwqmhdsglLNItKVSFSDR---GKYTCVASniYGTVNN--TVTLRVI  167  

                   -*
                     
    KIAA0626     -    -    

SM00408: domain 1 of 1, from 83 to 156: score 58.4, E = 9.4e-13
                   *->leGqsVtLtCpasgdpvpnItWlk..gkplp................
                      +eG+s+ ++C + g p+p+++W+ + gk l ++++++++++++ + +
    KIAA0626    83    KEGNSALINCSVYGIPDPQFKWYNsiGKLLKeeedekergggkwqmh 129  

                   sgstLtiknvsleDsGlYtCvArNsvg<-*
                   +++ L+i+ vs++D+G+YtCvA+N  g   
    KIAA0626   130 DSGLLNITKVSFSDRGKYTCVASNIYG    156  

//