hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08275512/chunk_1/iprscan-20080502-08275512.nocrc
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Query sequence: KIAA0626
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07679.6.fs Immunoglobulin I-set domain                     65.9    1.3e-18   1
PF07679.6.ls Immunoglobulin I-set domain                     67.8    3.1e-17   1
PF00047.15.fs Immunoglobulin domain                           44.0    2.6e-11   1
PF00047.15.ls Immunoglobulin domain                           45.9    1.2e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07679.6.fs   1/1      71   166 ..     1    96 []    65.9  1.3e-18
PF07679.6.ls   1/1      71   166 ..     1    96 []    67.8  3.1e-17
PF00047.15.fs   1/1      85   151 ..     1    65 []    44.0  2.6e-11
PF00047.15.ls   1/1      85   151 ..     1    65 []    45.9  1.2e-10

Alignments of top-scoring domains:
PF07679.6.fs: domain 1 of 1, from 71 to 166: score 65.9, E = 1.3e-18
                   *->PkFtqkpkdveVqeGesarfeCkVtGtPePtVsWfKd.Gqplssv..
                      P+++ +   + V+eG sa   C V+G P+P+  W+   G+ l++ ++
    KIAA0626    71    PVIIARTDHIIVKEGNSALINCSVYGIPDPQFKWYNSiGKLLKEEed 117  

                   .l.lpsdrfkvtydgGsgtytLtIsnvqpdDsGkYtCvAtNsaGeaeasa
                   + +  +++ +++ +g      L I +v  +D GkYtCvA+N +G++  ++
    KIAA0626   118 eKeRGGGKWQMHDSG-----LLNITKVSFSDRGKYTCVASNIYGTVNNTV 162  

                   eLtV<-*
                   +L V   
    KIAA0626   163 TLRV    166  

PF07679.6.ls: domain 1 of 1, from 71 to 166: score 67.8, E = 3.1e-17
                   *->PkFtqkpkdveVqeGesarfeCkVtGtPePtVsWfKd.Gqplssv..
                      P+++ +   + V+eG sa   C V+G P+P+  W+   G+ l++ ++
    KIAA0626    71    PVIIARTDHIIVKEGNSALINCSVYGIPDPQFKWYNSiGKLLKEEed 117  

                   .l.lpsdrfkvtydgGsgtytLtIsnvqpdDsGkYtCvAtNsaGeaeasa
                   + +  +++ +++ +g      L I +v  +D GkYtCvA+N +G++  ++
    KIAA0626   118 eKeRGGGKWQMHDSG-----LLNITKVSFSDRGKYTCVASNIYGTVNNTV 162  

                   eLtV<-*
                   +L V   
    KIAA0626   163 TLRV    166  

PF00047.15.fs: domain 1 of 1, from 85 to 151: score 44.0, E = 2.6e-11
                   *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq
                      G+s+ ++Csv   g pd+++ W+   ++l ++++    + +g+++  
    KIAA0626    85    GNSALINCSV--YGIPDPQFKWYNSIGkLLkEEEDEKERGGGKWQMH 129  

                   t..sLtitnvtpeDggtYtCvv<-*
                   ++++L+it+v+ +D g YtCv+   
    KIAA0626   130 DsgLLNITKVSFSDRGKYTCVA    151  

PF00047.15.ls: domain 1 of 1, from 85 to 151: score 45.9, E = 1.2e-10
                   *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq
                      G+s+ ++Csv   g pd+++ W+   ++l ++++    + +g+++  
    KIAA0626    85    GNSALINCSV--YGIPDPQFKWYNSIGkLLkEEEDEKERGGGKWQMH 129  

                   t..sLtitnvtpeDggtYtCvv<-*
                   ++++L+it+v+ +D g YtCv+   
    KIAA0626   130 DsgLLNITKVSFSDRGKYTCVA    151  

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