hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08202155/chunk_1/iprscan-20080502-08202155.nocrc
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Query sequence: KIAA0622
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     66.4    8.3e-17   7
PF02985.12.fs HEAT repeat                                     56.0    1.1e-14   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   2/7     190   226 ..     1    36 []    13.1     0.96
PF02985.12.ls   6/7    1092  1128 ..     1    36 []    22.2   0.0018
PF02985.12.ls   7/7    1211  1246 ..     1    36 []    23.4  0.00076

Alignments of top-scoring domains:
PF02985.12.ls: domain 2 of 7, from 190 to 226: score 13.1, E = 0.96
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++++l+p++ + +++++  VR+ ++e L  l++     
    KIAA0622   190    HtHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEW    226  

PF02985.12.ls: domain 6 of 7, from 1092 to 1128: score 22.2, E = 0.0018
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e++++++l lll+ l+D+d ++R+ A++ L +++++    
    KIAA0622  1092    EeHFKTILLLLLETLGDKDHSIRALALRVLREILRNQ    1128 

PF02985.12.ls: domain 7 of 7, from 1211 to 1246: score 23.4, E = 0.00076
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + ++ +++p ll++ + ++++VR+a++++L+a+++v+   
    KIAA0622  1211    QlLV-DIIPGLLQGYDNTESSVRKASVFCLVAIYSVI    1246 

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