# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01088b.fasta.nr -Q ../query/KIAA0613.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA0613, 734 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7785833 sequences
Expectation_n fit: rho(ln(x))= 7.2458+/-0.000222; mu= 4.4135+/- 0.012
mean_var=212.8879+/-40.581, 0's: 27 Z-trim: 145 B-trim: 270 in 1/64
Lambda= 0.087902
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=L ( 727) 5011 648.7 2.2e-183
gi|109089097|ref|XP_001085158.1| PREDICTED: simila ( 725) 4881 632.2 2e-178
gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM prote ( 723) 4456 578.3 3.3e-162
gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=L ( 723) 4453 578.0 4.3e-162
gi|194388262|dbj|BAG65515.1| unnamed protein produ ( 732) 4141 538.4 3.6e-150
gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1 ( 679) 3284 429.7 1.8e-117
gi|84872215|ref|NP_001034163.1| LIM domain binding ( 684) 3284 429.7 1.8e-117
gi|84875544|ref|NP_001034161.1| LIM domain binding ( 679) 3281 429.3 2.3e-117
gi|73953183|ref|XP_865054.1| PREDICTED: similar to ( 690) 3155 413.3 1.5e-112
gi|126272210|ref|XP_001363519.1| PREDICTED: simila ( 740) 2944 386.6 1.8e-104
gi|119600729|gb|EAW80323.1| LIM domain binding 3, ( 490) 2939 385.7 2.1e-104
gi|73953161|ref|XP_864848.1| PREDICTED: similar to ( 674) 2913 382.6 2.6e-103
gi|119600734|gb|EAW80328.1| LIM domain binding 3, ( 476) 2881 378.4 3.4e-102
gi|122056614|ref|NP_001073583.1| LIM domain bindin ( 617) 2651 349.3 2.4e-93
gi|5441369|emb|CAB46728.1| ZASP protein [Homo sapi ( 617) 2610 344.1 8.9e-92
gi|5441371|emb|CAB46729.1| ZASP protein [Homo sapi ( 470) 2601 342.9 1.7e-91
gi|109089095|ref|XP_001085274.1| PREDICTED: simila ( 625) 2588 341.4 6.2e-91
gi|28144143|gb|AAO26188.1| PDZ-LIM protein cypher3 ( 661) 2575 339.7 2e-90
gi|109089099|ref|XP_001084921.1| PREDICTED: simila ( 478) 2571 339.1 2.3e-90
gi|6969631|gb|AAF33848.1| oracle 2 protein [Mus mu ( 661) 2572 339.4 2.6e-90
gi|194206187|ref|XP_001916995.1| PREDICTED: simila ( 687) 2535 334.7 7e-89
gi|28144147|gb|AAO26190.1| PDZ-LIM protein cypher3 ( 622) 2518 332.5 2.9e-88
gi|73953181|ref|XP_852115.1| PREDICTED: similar to ( 621) 2201 292.3 3.7e-76
gi|73953185|ref|XP_536411.2| PREDICTED: similar to ( 632) 2198 291.9 4.9e-76
gi|194378210|dbj|BAG57855.1| unnamed protein produ ( 648) 2173 288.8 4.4e-75
gi|194042262|ref|XP_001925986.1| PREDICTED: simila ( 675) 2172 288.6 5e-75
gi|119600733|gb|EAW80327.1| LIM domain binding 3, ( 667) 2157 286.7 1.8e-74
gi|126272208|ref|XP_001363449.1| PREDICTED: simila ( 679) 2146 285.4 4.9e-74
gi|126272206|ref|XP_001363364.1| PREDICTED: simila ( 622) 2141 284.7 7.2e-74
gi|126272204|ref|XP_001363282.1| PREDICTED: simila ( 627) 2139 284.4 8.6e-74
gi|194042260|ref|XP_001925900.1| PREDICTED: simila ( 607) 2098 279.2 3.1e-72
gi|73953177|ref|XP_865000.1| PREDICTED: similar to ( 463) 2013 268.3 4.6e-69
gi|33339649|gb|AAQ14316.1|AF276807_1 Z-band altern ( 330) 1968 262.4 1.9e-67
gi|149635747|ref|XP_001509123.1| PREDICTED: simila ( 391) 1940 258.9 2.5e-66
gi|73587220|gb|AAI03440.1| LIM domain binding 3 [B ( 330) 1685 226.5 1.2e-56
gi|148692936|gb|EDL24883.1| LIM domain binding 3, ( 332) 1664 223.9 7.8e-56
gi|28144141|gb|AAO26187.1| PDZ-LIM protein cypher2 ( 327) 1648 221.8 3.2e-55
gi|194388458|dbj|BAG60197.1| unnamed protein produ ( 271) 1576 212.6 1.6e-52
gi|33339653|gb|AAQ14318.1|AF276809_1 Z-band altern ( 398) 1532 207.2 9.6e-51
gi|33339651|gb|AAQ14317.1|AF276808_1 Z-band altern ( 231) 1528 206.4 9.7e-51
gi|63030041|gb|AAY27884.1| cypher/ZASP splice vari ( 643) 1520 205.9 3.7e-50
gi|63030043|gb|AAY27885.1| cypher/ZASP splice vari ( 596) 1515 205.3 5.5e-50
gi|63030059|gb|AAY27893.1| cypher/ZASP splice vari ( 498) 1511 204.7 7e-50
gi|63030039|gb|AAY27883.1| cypher/ZASP splice vari ( 649) 1510 204.7 9.1e-50
gi|63030051|gb|AAY27889.1| cypher/ZASP splice vari ( 582) 1502 203.6 1.7e-49
gi|63030053|gb|AAY27890.1| cypher/ZASP splice vari ( 580) 1494 202.6 3.4e-49
gi|119600730|gb|EAW80324.1| LIM domain binding 3, ( 443) 1462 198.4 4.8e-48
gi|109075015|ref|XP_001103137.1| PREDICTED: simila ( 625) 1241 170.5 1.6e-39
gi|117645612|emb|CAL38272.1| hypothetical protein ( 625) 1240 170.4 1.8e-39
gi|114595210|ref|XP_001164521.1| PREDICTED: simila ( 625) 1234 169.7 3e-39
>>gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=LIM d (727 aa)
initn: 5011 init1: 5011 opt: 5011 Z-score: 3448.6 bits: 648.7 E(): 2.2e-183
Smith-Waterman score: 5011; 100.000% identity (100.000% similar) in 727 aa overlap (8-734:1-727)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
120 130 140 150 160 170
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
180 190 200 210 220 230
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
240 250 260 270 280 290
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
300 310 320 330 340 350
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
360 370 380 390 400 410
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
420 430 440 450 460 470
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
480 490 500 510 520 530
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
540 550 560 570 580 590
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
600 610 620 630 640 650
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|832 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
660 670 680 690 700 710
730
KIAA06 DRPLCKKHAHTINL
::::::::::::::
gi|832 DRPLCKKHAHTINL
720
>>gi|109089097|ref|XP_001085158.1| PREDICTED: similar to (725 aa)
initn: 3496 init1: 2906 opt: 4881 Z-score: 3359.6 bits: 632.2 E(): 2e-178
Smith-Waterman score: 4881; 97.524% identity (99.037% similar) in 727 aa overlap (8-734:1-725)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
:::::::::::::::::::::::::::::::::: ::::::::::: :::::. ::::::
gi|109 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSPPSAFSSLAEASAPGPPRVRLRAKTS
120 130 140 150 160 170
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PDGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
180 190 200 210 220 230
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|109 IKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
240 250 260 270 280 290
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
:::::::::::::::::::::::::::::: :::::::::::::::::::::.::..:::
gi|109 ALRRSSTPIEHAPVCTSQATTPLLPASAQPSAAASPSAASPPLATAAAHTAITSAAATAP
300 310 320 330 340 350
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|109 ASSPADSPRPQASSYSPATAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
360 370 380 390 400 410
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
::::::::::::::::::::.::::::::::::::: ::::::: ::::::::::::::
gi|109 STYSPSPGANYSPTPYTPSPTPAYTPSPAPAYTPSP--TYTPSPALAYTPSPAPNYNPAP
420 430 440 450 460 470
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SAAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
480 490 500 510 520 530
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
::::::::::::::::::::::::::::::::::::::::::.:::::.:::::::::::
gi|109 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKSSLADVCFVEEQ
540 550 560 570 580 590
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
600 610 620 630 640 650
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
660 670 680 690 700 710
730
KIAA06 DRPLCKKHAHTINL
::::::::::::::
gi|109 DRPLCKKHAHTINL
720
>>gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM protein c (723 aa)
initn: 4591 init1: 2604 opt: 4456 Z-score: 3068.3 bits: 578.3 E(): 3.3e-162
Smith-Waterman score: 4456; 88.721% identity (95.598% similar) in 727 aa overlap (8-734:1-723)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::::
gi|116 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKDPALDT
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
::::..::::::::::::. :. ::: .::. :. : : ::: : : .: ::.:
gi|116 NGSLATPSPSPEARASPGA---LEFGDTFSSSFSQTSVCSPLMEASGPVLPLGSPVAKAS
120 130 140 150 160 170
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:::. ..::.::: :::::::::::::::::::::::::::::::::::.:: :::::
gi|116 SEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLP
180 190 200 210 220 230
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
.:::::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::
gi|116 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
240 250 260 270 280 290
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...:
gi|116 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP
300 310 320 330 340
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:.::...::::::.::::.::: ::..:::::::::::::::::::::::::::::::::
gi|116 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
:.::::::::::::::::::::::::::::.:::::.:::::::::::::::::::.:.:
gi|116 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPAYTPSPAPNYTPTP
410 420 430 440 450 460
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: ::::
gi|116 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR
470 480 490 500 510 520
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
:: :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|116 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
530 540 550 560 570 580
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|116 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
590 600 610 620 630 640
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
650 660 670 680 690 700
730
KIAA06 DRPLCKKHAHTINL
:.::::::::.::.
gi|116 DKPLCKKHAHAINV
710 720
>>gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=LIM d (723 aa)
initn: 4583 init1: 2601 opt: 4453 Z-score: 3066.2 bits: 578.0 E(): 4.3e-162
Smith-Waterman score: 4453; 88.583% identity (95.598% similar) in 727 aa overlap (8-734:1-723)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|819 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::::
gi|819 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKDPALDT
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
::::..::::::::::::. :. ::: .::. :. : : ::: : : .: ::.:
gi|819 NGSLATPSPSPEARASPGA---LEFGDTFSSSFSQTSVCSPLMEASGPVLPLGSPVAKAS
120 130 140 150 160 170
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:::. ..::.::: :::::::::::::::::::::::::::::::::::.:: :::::
gi|819 SEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLLGGSLP
180 190 200 210 220 230
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
.:::::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::
gi|819 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
240 250 260 270 280 290
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...:
gi|819 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP
300 310 320 330 340
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:.::...::::::.::::.::: ::..:::::::::::::::::::::::::::::::::
gi|819 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
:.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.:
gi|819 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP
410 420 430 440 450 460
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: ::::
gi|819 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR
470 480 490 500 510 520
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
:: :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|819 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
530 540 550 560 570 580
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|819 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
590 600 610 620 630 640
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|819 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
650 660 670 680 690 700
730
KIAA06 DRPLCKKHAHTINL
:.::::::::.::.
gi|819 DKPLCKKHAHAINV
710 720
>>gi|194388262|dbj|BAG65515.1| unnamed protein product [ (732 aa)
initn: 4158 init1: 2643 opt: 4141 Z-score: 2852.3 bits: 538.4 E(): 3.6e-150
Smith-Waterman score: 4328; 83.522% identity (83.522% similar) in 795 aa overlap (8-734:1-732)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
120 130 140 150 160 170
190 200 210 220 230
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGG---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGADY
180 190 200 210 220 230
KIAA06 ------------------------------------------------------------
gi|194 QERFNPSALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQG
240 250 260 270 280 290
240 250 260 270 280 290
KIAA06 -----SLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 SDFSGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTE
300 310 320 330 340 350
300 310 320 330 340 350
KIAA06 FMQDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAI
:::::::::::::
gi|194 FMQDPDEEALRRS-----------------------------------------------
360
360 370 380 390 400 410
KIAA06 ASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP
::::::::::::::::::::::::::::::::::::::::::::
gi|194 ----------------RPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRP
370 380 390 400 410
420 430 440 450 460 470
KIAA06 SVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 SVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSP
420 430 440 450 460 470
480 490 500 510 520 530
KIAA06 APNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 APNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAG
480 490 500 510 520 530
540 550 560 570 580 590
KIAA06 PQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 PQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLA
540 550 560 570 580 590
600 610 620 630 640 650
KIAA06 DVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 DVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGN
600 610 620 630 640 650
660 670 680 690 700 710
KIAA06 SLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 SLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLE
660 670 680 690 700 710
720 730
KIAA06 GQPFYSKKDRPLCKKHAHTINL
::::::::::::::::::::::
gi|194 GQPFYSKKDRPLCKKHAHTINL
720 730
>>gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1s [M (679 aa)
initn: 4875 init1: 2604 opt: 3284 Z-score: 2265.3 bits: 429.7 E(): 1.8e-117
Smith-Waterman score: 3928; 80.193% identity (88.583% similar) in 727 aa overlap (8-734:1-679)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|281 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::
gi|281 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------
60 70 80 90 100
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
.:: ::. . . . :.:. . ::.:. :
gi|281 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG-----------
110 120 130 140
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:: :: . :::.::..:: ... : .. ...:.: . .::::
gi|281 -------LGGKA---TIIHAQYNTPISMYSQDAI-----MDAIAGQAQAQGSDF-SGSLP
150 160 170 180
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
.:::::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::
gi|281 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
190 200 210 220 230 240
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...:
gi|281 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP
250 260 270 280 290 300
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:.::...::::::.::::.::: ::..:::::::::::::::::::::::::::::::::
gi|281 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
310 320 330 340 350 360
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
:.::::::::::::::::::::::::::::.:::::.:::::::::::::::::::.:.:
gi|281 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPAYTPSPAPNYTPTP
370 380 390 400 410 420
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: ::::
gi|281 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR
430 440 450 460 470 480
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
:: :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|281 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
490 500 510 520 530 540
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|281 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
550 560 570 580 590 600
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|281 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
610 620 630 640 650 660
730
KIAA06 DRPLCKKHAHTINL
:.::::::::.::.
gi|281 DKPLCKKHAHAINV
670
>>gi|84872215|ref|NP_001034163.1| LIM domain binding 3 i (684 aa)
initn: 4865 init1: 2601 opt: 3284 Z-score: 2265.3 bits: 429.7 E(): 1.8e-117
Smith-Waterman score: 3926; 80.055% identity (88.446% similar) in 727 aa overlap (8-734:1-684)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::
gi|848 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------
60 70 80 90 100
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
.:: ::. . . . :.:. . ::.:. :
gi|848 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG-----------
110 120 130 140
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:: :: . :::.::..:: ... . : : . .:. . . : .:::
gi|848 -------LGGKA---TIIHAQYNTPISMYSQDAIMD-AIAGQAQAQGSDFSGASPLASLP
150 160 170 180 190
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
.:::::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::
gi|848 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
200 210 220 230 240 250
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...:
gi|848 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP
260 270 280 290 300 310
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:.::...::::::.::::.::: ::..:::::::::::::::::::::::::::::::::
gi|848 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
320 330 340 350 360 370
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
:.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.:
gi|848 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP
380 390 400 410 420 430
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: ::::
gi|848 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR
440 450 460 470 480 490
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
:: :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|848 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
500 510 520 530 540 550
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|848 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
560 570 580 590 600 610
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|848 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
620 630 640 650 660 670
730
KIAA06 DRPLCKKHAHTINL
:.::::::::.::.
gi|848 DKPLCKKHAHAINV
680
>>gi|84875544|ref|NP_001034161.1| LIM domain binding 3 i (679 aa)
initn: 4867 init1: 2601 opt: 3281 Z-score: 2263.3 bits: 429.3 E(): 2.3e-117
Smith-Waterman score: 3925; 80.055% identity (88.583% similar) in 727 aa overlap (8-734:1-679)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::.:.:::::::::
gi|848 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQK------
60 70 80 90 100
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
.:: ::. . . . :.:. . ::.:. :
gi|848 ---VVANSPA-----------NADYQERFNPSVLKDSALSTHKPIEVKG-----------
110 120 130 140
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
:: :: . :::.::..:: ... : .. ...:.: . .::::
gi|848 -------LGGKA---TIIHAQYNTPISMYSQDAI-----MDAIAGQAQAQGSDF-SGSLP
150 160 170 180
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
.:::::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::
gi|848 VKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
190 200 210 220 230 240
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
::::::::::::::::::::.:::::::: :::::: :::: :::::: : :.::...:
gi|848 ALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAA-THAAAASAAGP
250 260 270 280 290 300
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:.::...::::::.::::.::: ::..:::::::::::::::::::::::::::::::::
gi|848 AASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
310 320 330 340 350 360
430 440 450 460 470 480
KIAA06 STYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAP
:.::::::::::::::::::::::::::::.:::::.:::.:::::::::::::::.:.:
gi|848 SSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTP
370 380 390 400 410 420
490 500 510 520 530 540
KIAA06 SVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLAR
:.::::::.: :::::::::::::::::::::::..::::::::.:::.:.:::: ::::
gi|848 SAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLAR
430 440 450 460 470 480
550 560 570 580 590 600
KIAA06 GTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQ
:: :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|848 GTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQ
490 500 510 520 530 540
610 620 630 640 650 660
KIAA06 NNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|848 NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
550 560 570 580 590 600
670 680 690 700 710 720
KIAA06 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|848 EPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
610 620 630 640 650 660
730
KIAA06 DRPLCKKHAHTINL
:.::::::::.::.
gi|848 DKPLCKKHAHAINV
670
>>gi|73953183|ref|XP_865054.1| PREDICTED: similar to LIM (690 aa)
initn: 3461 init1: 2091 opt: 3155 Z-score: 2176.9 bits: 413.3 E(): 1.5e-112
Smith-Waterman score: 3907; 79.726% identity (88.082% similar) in 730 aa overlap (8-734:1-690)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: :
gi|739 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQSPLPVIPHQKDPAGDM
60 70 80 90 100 110
130 140 150 160 170 180
KIAA06 NGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTS
.:: : :: ::: : ::: :. ::.::. .:::.. .
gi|739 SGS-------PTAR-SPGPLGPPELGPSSSPSFSQ-------------SPPRGG----PG
120 130 140
190 200 210 220 230 240
KIAA06 PEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLP
::: ::. :...: :::::::::::::::::::.:.::: ::: :.::::::::
gi|739 TEGAP---GPR---GQGRPAQYNNPIGLYSAETLREMAQVYRMSLGGKAWGAGLPGGSLP
150 160 170 180 190 200
250 260 270 280 290 300
KIAA06 IKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEE
::::::::::::::::::.:::::::::::::::::::::::::::::::::.:::::::
gi|739 IKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEE
210 220 230 240 250 260
310 320 330 340 350 360
KIAA06 ALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAP
:::::::: ::::::::::.::: :::::::::: :::::: ..::: .: :. :
gi|739 ALRRSSTPTEHAPVCTSQAATPLPPASAQPPAAAPRSAASPPPSAAAACAAAAT-----P
270 280 290 300 310
370 380 390 400 410 420
KIAA06 ASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPA
:::::::::::::.:: : :.: :::.: :::. ::::::::::::::::::::::.::
gi|739 ASSPADSPRPQASAYSLAKATSPAPASHP-YSEASAAPAPKPRVVTTASIRPSVYQPAPA
320 330 340 350 360 370
430 440 450 460 470
KIAA06 STYSPSPGANYSPTPYTPSP-APAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPN--YN
.. .: ::. :::. :. :... :: .:.::: :.:.:.: :::::::. :.
gi|739 GSKAPRPGGLTPPTPHPPTHHPPTHSTVPAATYSPSPGPSYSPAP---YTPSPAPGPGYS
380 390 400 410 420 430
480 490 500 510 520 530
KIAA06 PAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPP
:.::.::.:::.: :::::::.:::::::::::::..: :.::::::.:.: : :::: :
gi|739 PTPSAAYGGGPVESASRPPWVADDSFSQKFAPGKSSSSASRQTLPRGAPTYGPPGPQVSP
440 450 460 470 480 490
540 550 560 570 580 590
KIAA06 LARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFV
:::: ::::::::::::::::::::::::::::::::::::::::.::::::::::::::
gi|739 LARGIVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFV
500 510 520 530 540 550
600 610 620 630 640 650
KIAA06 EEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHM
:::.::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|739 EEQSNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHM
560 570 580 590 600 610
660 670 680 690 700 710
KIAA06 EDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFY
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 EDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFY
620 630 640 650 660 670
720 730
KIAA06 SKKDRPLCKKHAHTINL
::::.::::::::.::.
gi|739 SKKDKPLCKKHAHAINV
680 690
>>gi|126272210|ref|XP_001363519.1| PREDICTED: similar to (740 aa)
initn: 3295 init1: 1481 opt: 2944 Z-score: 2031.9 bits: 386.6 E(): 1.8e-104
Smith-Waterman score: 3799; 74.967% identity (86.285% similar) in 751 aa overlap (8-734:1-740)
10 20 30 40 50 60
KIAA06 AAADSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAID
:.:::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|126 MAYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLTQGDLVVAID
10 20 30 40 50
70 80 90 100 110 120
KIAA06 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDT
::::::::::::::::::::::::::::::::::::::.:: ...:.:::::::: : .
gi|126 GVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTSAPRIESPMPVIPHQKDSASEM
60 70 80 90 100 110
130 140 150 160
KIAA06 NGSLVAPSPSPEARASPGTPGTP-----------ELRPTFSPAFSRPSAFSSLAEASDPG
::.:.: : : .. : ::: : ::: . :. . .:: .:.:.
gi|126 NGNLTALSSIPSPKGEPPTPGMTNGTGVGTLSIQEASQTFSSS-SQATIISSHMVTSEPS
120 130 140 150 160 170
170 180 190 200 210 220
KIAA06 PPRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKA
:::.: :..::.. : :.::: ::.: :::::::::::::::::::.:::.: ::::
gi|126 PPRGSQGLKANPEATADSLSPKAQVGSGQQRQYNNPIGLYSAETLREMAEMYQLSQRGKA
180 190 200 210 220 230
230 240 250 260 270 280
KIAA06 SGVGLPGGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMT
:.. : :..:.:::::::::::::::::.:::::::.::::::::::::::::::::::
gi|126 PGTAPPRGNIPVKDLAVDSASPVYQAVIKNQNKPEDEVDEWARRSSNLQSRSFRILAQMT
240 250 260 270 280 290
290 300 310 320 330 340
KIAA06 GTEFMQDPDEEALRRSSTPIEHAPVCTSQATTP---LLPASAQPPAAASPSAASPPLATA
:::.::::::::::::: :. .: ...:: ..: . : . :: :: .
gi|126 GTEYMQDPDEEALRRSSIREEQKSLCFMMVVTPYPMIIPERSLWPKLSPPSPPPPPPVCP
300 310 320 330 340 350
350 360 370 380 390 400
KIAA06 AAHTAIASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVT
.. :.. .. ::: : .::::::..:: :: .:.:.::. ::::::::
gi|126 GSFTSLRASLLTAPLFF-----RILGSSYSPAASASHAP----TYNEAPAT-APKPRVVT
360 370 380 390 400
410 420 430 440 450 460
KIAA06 TASIRPSVYQPVPASTYSPSPGANYSPTP-YTPSPAPAYTPSPAPAYTPSPVPTYTPSPA
:::::::::: ::.:.:::.:::.:::.: :::::::::::::::::::::.:.::::::
gi|126 TASIRPSVYQSVPTSSYSPAPGATYSPAPAYTPSPAPAYTPSPAPAYTPSPAPAYTPSPA
410 420 430 440 450 460
470 480 490 500 510 520
KIAA06 PAYTPSPAPNYNP-----APSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQT
:::::::::.::: :::..::.::.::::::::::::.:::::::::.:::::::.
gi|126 PAYTPSPAPSYNPSPYSPAPSATYSSGPGEPASRPPWVTDDNFSQKFAPGKTTTSISKQV
470 480 490 500 510 520
530 540 550 560 570
KIAA06 LPRGGPA----YTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRS
::::.:. ::::: ::: :::::.:::::::::.::: :::::..::::::::::::
gi|126 LPRGAPGPSPGYTPAGTQVPTLARGTIQRAERFPASNRTPHCGHCNSIIRGPFLVAMGRS
530 540 550 560 570 580
580 590 600 610 620 630
KIAA06 WHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTW
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 WHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTW
590 600 610 620 630 640
640 650 660 670 680 690
KIAA06 HTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 HTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT
650 660 670 680 690 700
700 710 720 730
KIAA06 WHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHTINL
:::::::::::::::::::::::::.::::::::.::.
gi|126 WHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
710 720 730 740
734 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Thu Mar 5 09:52:46 2009 done: Thu Mar 5 09:56:44 2009
Total Scan time: 1604.790 Total Display time: 0.430
Function used was FASTA [version 34.26.5 April 26, 2007]