hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07241347/chunk_1/iprscan-20080502-07241347.nocrc
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Query sequence: KIAA0589
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00330                                                 558.2   3.1e-163   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00330    1/1     122   463 ..     1   438 []   558.2 3.1e-163

Alignments of top-scoring domains:
SM00330: domain 1 of 1, from 122 to 463: score 558.2, E = 3.1e-163
                   *->lpsdfkakekikfptpgsgleltPshgsadFkfKdYcPevFRaLRev
                      l++df+ +e i fp++gs  +ltP+h++ dF+fK+Y+P++FR++Re 
    KIAA0589   122    LMQDFYVVESIFFPSEGS--NLTPAHHFQDFRFKTYAPVAFRYFRE- 165  

                   LfgidpaDylrSLcrsplLlelssgGKSGSfFylSqDDRFiIKtlsksEi
                   Lfgi+p+Dyl+SLc++pl +els++G+SGS Fy++ DD+FiIKt+ ++E+
    KIAA0589   166 LFGIRPDDYLYSLCNEPL-IELSNPGASGSLFYVTSDDEFIIKTVMHKEA 214  

                   kvllkFApmLpnYyehvvqnpgnTLLpKffGlyrVkvkgstsntgkKirf
                   ++l+   ++Lp+Yy++++qnp +TLLpKf+Gly+V++ g      k+ir+
    KIAA0589   215 EFLQ---KLLPGYYMNLNQNP-RTLLPKFYGLYCVQSGG------KNIRV 254  

                   lVMeNLFyselkihrkYDLKGStrgReaskdeaikqkentvLKDlDlvee
                   +VM+N++++ +k+h k+DLKGSt++R+ask+e  k+k+ ++ KDlD+ ++
    KIAA0589   255 VVMNNILPRVVKMHLKFDLKGSTYKRRASKKE--KEKSFPTYKDLDFMQD 302  

                   iynqpiyvdplakkaLlkqikrDceFLeslkIMDYSLLVGIhdkesgqre
                   + + ++ +d + ++aL k+++rDc++Les+kIMDYSLL+G+h+++  +re
    KIAA0589   303 M-PEGLLLDADTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQHERE 351  

                   eielepnyssdeesssessaslkqektassspdrsstamyscvpsrdSve
                   +  +  +++sde ++  ++a                              
    KIAA0589   352 RQAQGAQSTSDEKRPVGQKA------------------------------ 371  

                   sesSvaiqsvtsssarqalvststaseditgellvsdetdidvpfggnip
                                       ++sta+e+i+g++ ++   + d+ +gg ip
    KIAA0589   372 --------------------LYSTAMESIQGGAARGEAIESDDTMGG-IP 400  

                   arairaerrrverkeiedkeesatkegenEaydvvLylGIIDiLqtYtld
                   a ++r+er                         + L +GIIDiLq+Y++ 
    KIAA0589   401 AVNGRGER-------------------------LLLHIGIIDILQSYRFI 425  

                   KKLEHavKsighdgGkgktiSvVsPeqYskRFrdFmdkyFl<-*
                   KKLEH++K++ hdg   +t+Sv++P++Y++RF +Fm++ ++   
    KIAA0589   426 KKLEHTWKALVHDG---DTVSVHRPSFYAERFFKFMSNTVF    463  

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