hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-07241347/chunk_1/iprscan-20080502-07241347.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0589 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01504.9.ls Phosphatidylinositol-4-phosphate 5-Kinase 582.4 4.1e-172 1 PF01504.9.fs Phosphatidylinositol-4-phosphate 5-Kinase 580.5 1.5e-171 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF01504.9.fs 1/1 176 462 .. 1 356 [] 580.5 1.5e-171 PF01504.9.ls 1/1 176 462 .. 1 356 [] 582.4 4.1e-172 Alignments of top-scoring domains: PF01504.9.fs: domain 1 of 1, from 176 to 462: score 580.5, E = 1.5e-171 *->lSlCsspllrElsspGkSGSrFYlsqDdrFiIKtvkksEvkvLlkmL +SlC++pl+ Els+pG+SGS+FY+++Dd+FiIKtv+++E+++L+k+L KIAA0589 176 YSLCNEPLI-ELSNPGASGSLFYVTSDDEFIIKTVMHKEAEFLQKLL 221 PgYYehinqnpgQkrnTLLpKFfGlyrvkvkgSfgNkekkkkirfvVMnN PgYY+++nqnp +TLLpKF+Gly+v+++ g k+ir+vVMnN KIAA0589 222 PGYYMNLNQNP----RTLLPKFYGLYCVQSG---G-----KNIRVVVMNN 259 LFpselkihrkYDLKGStygReaskkekrLaeekelpTLKDlDfleegqk ++p+ +k+h k+DLKGSty+R+askkek ek pT+KDlDf++++++ KIAA0589 260 ILPRVVKMHLKFDLKGSTYKRRASKKEK----EKSFPTYKDLDFMQDMPE 305 glyldslskkaLlkqikrDCefLeslkIMDYSLLvGiHdidrgCqgsede gl ld ++++aL+k+++rDC++Les+kIMDYSLL+G+H+id+ ++++ KIAA0589 306 GLLLDADTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQH---ERER 352 ee.eaqensideepeaqgkqasaspdrsSvamqsckpmRdsveseyslss + + aq+ s++++p q+ +l+s KIAA0589 353 QAqGAQSTSDEKRPVGQK----------------------------ALYS 374 tsvgsiqasfrnlgriefgenipagairarrqedkeesatielSregeee t+++siq+ + +++ ie + +++g+i+a + ++ KIAA0589 375 TAMESIQGGAARGEAIESD--DTMGGIPAVN-----------------GR 405 gedlvLYlGIIDILqdYdlkKKlEHawKSlqhdgGkGktISvvnPefYsk ge+l+L++GIIDILq+Y++ KKlEH+wK+l+hdg +t+Sv++P+fY++ KIAA0589 406 GERLLLHIGIIDILQSYRFIKKLEHTWKALVHDG---DTVSVHRPSFYAE 452 RFldFmskif<-* RF++Fms+++ KIAA0589 453 RFFKFMSNTV 462 PF01504.9.ls: domain 1 of 1, from 176 to 462: score 582.4, E = 4.1e-172 *->lSlCsspllrElsspGkSGSrFYlsqDdrFiIKtvkksEvkvLlkmL +SlC++pl+ Els+pG+SGS+FY+++Dd+FiIKtv+++E+++L+k+L KIAA0589 176 YSLCNEPLI-ELSNPGASGSLFYVTSDDEFIIKTVMHKEAEFLQKLL 221 PgYYehinqnpgQkrnTLLpKFfGlyrvkvkgSfgNkekkkkirfvVMnN PgYY+++nqnp +TLLpKF+Gly+v+++ g k+ir+vVMnN KIAA0589 222 PGYYMNLNQNP----RTLLPKFYGLYCVQSG---G-----KNIRVVVMNN 259 LFpselkihrkYDLKGStygReaskkekrLaeekelpTLKDlDfleegqk ++p+ +k+h k+DLKGSty+R+askkek ek pT+KDlDf++++++ KIAA0589 260 ILPRVVKMHLKFDLKGSTYKRRASKKEK----EKSFPTYKDLDFMQDMPE 305 glyldslskkaLlkqikrDCefLeslkIMDYSLLvGiHdidrgCqgsede gl ld ++++aL+k+++rDC++Les+kIMDYSLL+G+H+id+ ++++ KIAA0589 306 GLLLDADTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQH---ERER 352 ee.eaqensideepeaqgkqasaspdrsSvamqsckpmRdsveseyslss + + aq+ s++++p q+ +l+s KIAA0589 353 QAqGAQSTSDEKRPVGQK----------------------------ALYS 374 tsvgsiqasfrnlgriefgenipagairarrqedkeesatielSregeee t+++siq+ + +++ ie + +++g+i+a + ++ KIAA0589 375 TAMESIQGGAARGEAIESD--DTMGGIPAVN-----------------GR 405 gedlvLYlGIIDILqdYdlkKKlEHawKSlqhdgGkGktISvvnPefYsk ge+l+L++GIIDILq+Y++ KKlEH+wK+l+hdg +t+Sv++P+fY++ KIAA0589 406 GERLLLHIGIIDILQSYRFIKKLEHTWKALVHDG---DTVSVHRPSFYAE 452 RFldFmskif<-* RF++Fms+++ KIAA0589 453 RFFKFMSNTV 462 //